Gene PHATRDRAFT_39601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39601 
Symbol 
ID7195388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp238347 
End bp239321 
Gene Length975 bp 
Protein Length324 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183704 
Protein GI219126940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.19657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGTGG ATCACGTAAT AACGATCCTA ACAGCTAGCA ATCTGGAGAA GCTTATAGGC 
GATGACGAGA GAGCTGAGTA TGAGTACGAA GAATCCAATG ATGAAACTTC AACAGATTCA
TCCTCGGATG TCGACTCCGA AGAGGAGAGT TCTGTGTCGA CAACCGATGC TTGTCTCGAC
TGGGCTGGCC ATCAGCGACC AGAGTCGGTA AACCAGAATC AGTTCAAGGG GATTTTCGTT
TCGGAAGAAG TCCAGCACAT GCTGGCCATG AGCTCCAGTG AGCAAAACAT TTTTAGTAAA
ATGCTGGAGC AAGATCAGAC TGTCCGCCAC ATGCTGCGTC GCAGCTCGGA GCCCCGCAAC
AATCCTAGCG GTAACATCGG ACTTATTGTT CAGACCATTT TGCCTTCCCA AAGGAAAGGA
CCAACTGAGG AGAATGGTAA AGTGGAGCAG AATCCCAACG AAAAGTTGCA AGAGATACTT
TGCCAGGAAG GTGTTTCCGC GTTGCCAAGA AAGTATGACT CTCTGGAGTC TTTCTTTGTG
AAAGTGTTGC CGGAGATGAT CCATGCATAT GAAATGAAAT TGGTGCATGC TGTCCGCGAC
AATAATTTGG ATGCTCTTTT TCTTCTCTTG GATACGGTCA AATCATTTCA GTGCTGCAAT
CGTTTTGGGG AGTCAATTGT GCACTTGGCA TCTCGAAGGG GATCGACCGA AGCGTTGCGT
TTTCTTGTGG CACAAGGAGT AGACGTAAGG GTATGTTGTG ACTCGGGGCG CAATCCTTTG
CATGACGGTT GCTGGAGCTC CCGGCCAAAT TTTGAGTGCA TTCAAGTCAT ATTGGATGAG
TTTCCCGACT TGCTTCTTAT TCAGGATAGA CGAGGTTTTA CGCCCCTTCA GTACGCCCCG
CGCGATAGTT GGGGCGAGTG GAACCAATTT TTGGATGGAA ATCGTAGTTC TTTGATCCCA
AAGAGCTTGA CGTAG
 
Protein sequence
MEVDHVITIL TASNLEKLIG DDERAEYEYE ESNDETSTDS SSDVDSEEES SVSTTDACLD 
WAGHQRPESV NQNQFKGIFV SEEVQHMLAM SSSEQNIFSK MLEQDQTVRH MLRRSSEPRN
NPSGNIGLIV QTILPSQRKG PTEENGKVEQ NPNEKLQEIL CQEGVSALPR KYDSLESFFV
KVLPEMIHAY EMKLVHAVRD NNLDALFLLL DTVKSFQCCN RFGESIVHLA SRRGSTEALR
FLVAQGVDVR VCCDSGRNPL HDGCWSSRPN FECIQVILDE FPDLLLIQDR RGFTPLQYAP
RDSWGEWNQF LDGNRSSLIP KSLT