Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39601 |
Symbol | |
ID | 7195388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | - |
Start bp | 238347 |
End bp | 239321 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183704 |
Protein GI | 219126940 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.19657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGGTGG ATCACGTAAT AACGATCCTA ACAGCTAGCA ATCTGGAGAA GCTTATAGGC GATGACGAGA GAGCTGAGTA TGAGTACGAA GAATCCAATG ATGAAACTTC AACAGATTCA TCCTCGGATG TCGACTCCGA AGAGGAGAGT TCTGTGTCGA CAACCGATGC TTGTCTCGAC TGGGCTGGCC ATCAGCGACC AGAGTCGGTA AACCAGAATC AGTTCAAGGG GATTTTCGTT TCGGAAGAAG TCCAGCACAT GCTGGCCATG AGCTCCAGTG AGCAAAACAT TTTTAGTAAA ATGCTGGAGC AAGATCAGAC TGTCCGCCAC ATGCTGCGTC GCAGCTCGGA GCCCCGCAAC AATCCTAGCG GTAACATCGG ACTTATTGTT CAGACCATTT TGCCTTCCCA AAGGAAAGGA CCAACTGAGG AGAATGGTAA AGTGGAGCAG AATCCCAACG AAAAGTTGCA AGAGATACTT TGCCAGGAAG GTGTTTCCGC GTTGCCAAGA AAGTATGACT CTCTGGAGTC TTTCTTTGTG AAAGTGTTGC CGGAGATGAT CCATGCATAT GAAATGAAAT TGGTGCATGC TGTCCGCGAC AATAATTTGG ATGCTCTTTT TCTTCTCTTG GATACGGTCA AATCATTTCA GTGCTGCAAT CGTTTTGGGG AGTCAATTGT GCACTTGGCA TCTCGAAGGG GATCGACCGA AGCGTTGCGT TTTCTTGTGG CACAAGGAGT AGACGTAAGG GTATGTTGTG ACTCGGGGCG CAATCCTTTG CATGACGGTT GCTGGAGCTC CCGGCCAAAT TTTGAGTGCA TTCAAGTCAT ATTGGATGAG TTTCCCGACT TGCTTCTTAT TCAGGATAGA CGAGGTTTTA CGCCCCTTCA GTACGCCCCG CGCGATAGTT GGGGCGAGTG GAACCAATTT TTGGATGGAA ATCGTAGTTC TTTGATCCCA AAGAGCTTGA CGTAG
|
Protein sequence | MEVDHVITIL TASNLEKLIG DDERAEYEYE ESNDETSTDS SSDVDSEEES SVSTTDACLD WAGHQRPESV NQNQFKGIFV SEEVQHMLAM SSSEQNIFSK MLEQDQTVRH MLRRSSEPRN NPSGNIGLIV QTILPSQRKG PTEENGKVEQ NPNEKLQEIL CQEGVSALPR KYDSLESFFV KVLPEMIHAY EMKLVHAVRD NNLDALFLLL DTVKSFQCCN RFGESIVHLA SRRGSTEALR FLVAQGVDVR VCCDSGRNPL HDGCWSSRPN FECIQVILDE FPDLLLIQDR RGFTPLQYAP RDSWGEWNQF LDGNRSSLIP KSLT
|
| |