Gene PHATRDRAFT_39576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39576 
Symbol 
ID7195378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp174715 
End bp175065 
Gene Length351 bp 
Protein Length116 aa 
Translation table 
GC content41% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183565 
Protein GI219126651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.680797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTGGG CATGCCAAGA CAGGGCATTT AACATTGTTG ACAAAGTGAA GGACAATGTG 
GCATTCAAAG CCTGGCAGAT GTTGAAGAAG AAATACGAAG TGAAGGAGGT TGATGCACAC
ATTCAGCTGC AGGAAAAGTT TCAGGAATGC AAGATGGAGT CGGATAAAGA TGACCCAACA
ATTTTTATTG AAGAGCTTGC AGTTATCAAT GGATACATGG GAGCCATGCA GGATAAGTAT
GAGAAGGATG ATGTGGAAAT GATATTGCAT ATCTTCTCAA AGTTGCCGGG TTTGTACTTG
GAGTTCATAA CAAGACAGAA AGCAAAAGGC ATTCAGAATA CATCAGGTTA G
 
Protein sequence
MLWACQDRAF NIVDKVKDNV AFKAWQMLKK KYEVKEVDAH IQLQEKFQEC KMESDKDDPT 
IFIEELAVIN GYMGAMQDKY EKDDVEMILH IFSKLPGLYL EFITRQKAKG IQNTSG