| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39571 |
|---|
| Symbol | |
|---|
| ID | 7195241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011688 |
|---|
| Strand | + |
|---|
| Start bp | 160215 |
|---|
| End bp | 161581 |
|---|
| Gene Length | 1367 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183561 |
|---|
| Protein GI | 219126642 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGAA TTCTACTTTT TGCTATGATT CTTCTGGATG CAGCCAGCCT TGCTCAGCCT
AATGACGAGG CGCAAATCCA TAAAAGCGTA TTTGAGAAGC GAGAGCTGAT GAATAATTAC
ATAGAACTGA GCATGAGTAT GCCAGTCATT GGGAAGGGCA AGGGTAAAGG TAAAGGAAAG
GGAATCGACT ACAGCCTATC ATCGAAATCC TCAAAGGCCA GCTGGTCCAA ATCGTCCAAG
TCAAAGGGAA AAGGAAGCAG CAAAAAGAGC GATAAAAGTG GAAAGGGTGG TGGCAAAGAA
ATTTCGCTCG TTCCCACAGT TCCGACCCCT ACTACGGCTC CAATTGGTAA GTTGCGCTTG
TCTTACATTA AAAAGGAAAA ACCCAAATTG AAAGATCCTA ACCGACTTAA CATTCAGTGG
CACCTCCTAC TATCACTACA ACCTCCCCGT TTGGTAGTAC AATGAGTGAG TCACGTAAGT
ACAGCGAAGC AGAACCTATT TGCCCGAAAT TTAATAAACT AGATTTTTCA CTAACTGTAC
CTTCCCGTCC ATCAGCAAAT TCGACGCCTG CGCCCACGTT GACACCAGTA TCTATTTCTC
CATTCACGAT TCTGTATACC ATCGAACAAT TCCGCCTCCC TCTCGCAAGC GAGTATGTTT
CGGTCGCAAA TCTCACAGCG AACTATTTGA ATGAGTACTT TCGAGCAAAT TTCCAAGAGA
CGAGTCTTGT AGACTTTGTG ATTGCCGACA CGATGATGAC TGACAACAAC TTTCAGTTTG
GACAGCCTGT CGAGATTGAT TACAGAACAC AGCTTACGTT TGCGTCGGCT TCCTTTATTC
CTTCTACAGA GGAATTCGAC GAGTTGTTGG CCAGTGCGTT CCGCGACGAC AACTTGGCAA
TCTACATTTC TCTTTTGAAC AGTTTGCCAA TCAGCAACAT CTTCCAAACA ACGTCGCTTG
TTACTTTTGA AGGATCTACT TCCGCTACCG TACCCGCGAC TAGTGCAGAC TCCGCCGCAA
GAGCAGCCGG AATCGCGGTA GCAGCCGGTG CTGGAGCCCT TATCTTTATC ATCGCTGGTG
TAGTTATGTA TCGCCGAAAG GAAAGAGAGG AAGTTGGCAA GCGCCTCGAT GAAGATGGGC
AGATGACAGT TGCTGGTGAC ACGTGTGGAG GCTCGTCAAT GGATTCCCAA TCGGTGGTTA
ATCAAACACA TGCAATGAAC GACGCAGATG GCTCCTCGGT ATCGGAATTG GGCGACTTTC
AGGTCGCTCC ATCAAATCAT CCCATTCTCG AAGAAGGAGC TGAAGAGGAA ACGGACGACG
AGTGCGACTT TGAAGAAAGA GGCCAACTTT CGGAAGTCCA ACTGTAA
|
|---|
| Protein sequence | MMRILLFAMI LLDAASLAQP NDEAQIHKSV FEKRELMNNY IELSMSMPVI GKGKGKGKGK
GIDYSLSSKS SKASWSKSSK SKGKGSSKKS DKSGKGGGKE ISLVPTVPTP TTAPIVAPPT
ITTTSPFGST MSESPNSTPA PTLTPVSISP FTILYTIEQF RLPLASEYVS VANLTANYLN
EYFRANFQET SLVDFVIADT MMTDNNFQFG QPVEIDYRTQ LTFASASFIP STEEFDELLA
SAFRDDNLAI YISLLNSLPI SNIFQTTSLV TFEGSTSATV PATSADSAAR AAGIAVAAGA
GALIFIIAGV VMYRRKEREE VGKRLDEDGQ MTVAGDTCGG SSMDSQSVVN QTHAMNDADG
SSVSELGDFQ VAPSNHPILE EGAEEETDDE CDFEERGQLS EVQL
|
|---|
| |