Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39559 |
Symbol | |
ID | 7195235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | - |
Start bp | 124962 |
End bp | 125528 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183681 |
Protein GI | 219126892 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACTT CAACGCACAA ATCGAAGCAC AATTTCTTGT TCCGGAAAGC CAACGCCGTC CGAAAGCAGA GGGCTTTCAA AGACCGTTCA GACCGACAGA CGCCGGTGAA CACTGTGGCC AAGAAGCATG GGGAGTCGAT CGAAGAACTA CTTGTCACAC AGAATCTTTT TGATGAAGGC ACTCTGCGAC CGGGTTTTGG AAGAGAAAAA AGATTTACGA GATACAAGAA AGTTAAACAG GCAACTATAG ATGTCAACAG ATCTTCGGAA AAGGTTGTCG ATCCTATGAA AGATGAAGGA GTGATTCGTC AGGACTTTTC AGCTGAGAAG GTTTTCAGCA AGCATGCCGA TAGCACGGTG GACAATCCCG CAGTCAATAC CGACAAGCAG AAAACCGTAG ACGTGGCAGA AACTAGAGAG GAAGCATCAG CCCCTATAAG TCCGGATAGA AACAAGGTAG TAGGAGTTAA AGAAGAAAGG AGCGAGTCAC ACAATGAGGA GGAACAAAGT GCGGGAATTA GCCTTTTGAC TGCGCCAGCG ACGGGGTACT TCTGTGGGTG TGTCTAA
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Protein sequence | MDTSTHKSKH NFLFRKANAV RKQRAFKDRS DRQTPVNTVA KKHGESIEEL LVTQNLFDEG TLRPGFGREK RFTRYKKVKQ ATIDVNRSSE KVVDPMKDEG VIRQDFSAEK VFSKHADSTV DNPAVNTDKQ KTVDVAETRE EASAPISPDR NKVVGVKEER SESHNEEEQS AGISLLTAPA TGYFCGCV
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