Gene PHATRDRAFT_39559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39559 
Symbol 
ID7195235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp124962 
End bp125528 
Gene Length567 bp 
Protein Length188 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183681 
Protein GI219126892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACTT CAACGCACAA ATCGAAGCAC AATTTCTTGT TCCGGAAAGC CAACGCCGTC 
CGAAAGCAGA GGGCTTTCAA AGACCGTTCA GACCGACAGA CGCCGGTGAA CACTGTGGCC
AAGAAGCATG GGGAGTCGAT CGAAGAACTA CTTGTCACAC AGAATCTTTT TGATGAAGGC
ACTCTGCGAC CGGGTTTTGG AAGAGAAAAA AGATTTACGA GATACAAGAA AGTTAAACAG
GCAACTATAG ATGTCAACAG ATCTTCGGAA AAGGTTGTCG ATCCTATGAA AGATGAAGGA
GTGATTCGTC AGGACTTTTC AGCTGAGAAG GTTTTCAGCA AGCATGCCGA TAGCACGGTG
GACAATCCCG CAGTCAATAC CGACAAGCAG AAAACCGTAG ACGTGGCAGA AACTAGAGAG
GAAGCATCAG CCCCTATAAG TCCGGATAGA AACAAGGTAG TAGGAGTTAA AGAAGAAAGG
AGCGAGTCAC ACAATGAGGA GGAACAAAGT GCGGGAATTA GCCTTTTGAC TGCGCCAGCG
ACGGGGTACT TCTGTGGGTG TGTCTAA
 
Protein sequence
MDTSTHKSKH NFLFRKANAV RKQRAFKDRS DRQTPVNTVA KKHGESIEEL LVTQNLFDEG 
TLRPGFGREK RFTRYKKVKQ ATIDVNRSSE KVVDPMKDEG VIRQDFSAEK VFSKHADSTV
DNPAVNTDKQ KTVDVAETRE EASAPISPDR NKVVGVKEER SESHNEEEQS AGISLLTAPA
TGYFCGCV