| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39556 |
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| Symbol | |
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| ID | 7195367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | - |
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| Start bp | 119249 |
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| End bp | 121084 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183679 |
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| Protein GI | 219126887 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.423065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGACC GTGACGTACC CCATTGGGAC TCACAGTACC CATCCATAGG TTCCTTACCC
GGCAGAGGTG TCGCATCCCG GAATGACCCA CAAGGGGGCA ACTATCGTTT TTTGGAGGAT
TCACGGGTCA TTTTATTCGT GTGGTCCCAG AACTGTATCA GTCTCCTCCC ATTGCCATGC
CCGTACACGG CAATGGGTGT GGAGTGGAGT GCCCAGTTCT TCCCTCAACC GCGGAGTAGG
AACAGTCGAC TGACGAACAA TGCAACAGGA ACTACCAGCC AACGGACGGG TAACCGTACC
CGTTCCATGA TTCCCCTTGT CCGCGGAATG CGGGGCAAAG CAGTCGTCGG TCTCGTGACG
ATGGGCTTGG TGTGGACTTG GCGATCGCTC CGCTGGGCCG ACGAAGGCAT CCTCTCGGTA
GCAGGAAACC CCTTGAGTCA TCCGTTGGCT GGCGTGTCAA TACCCCTTCC GACCTCGTAT
CCCGTGCAGG TCTTGCTACA CGTCATTCAC ACCCGTTTCC AACAACACCA ACCCCGTTTG
GTACACTTGG GTCGAGCCCG TCTCGCACTC TTCCGTACCC TCTGTGTACC GTCCTTGCGA
GCGCAAACCG AAACCAACTT TCTCTGGATC CTCCGAGTCG ATCCCGCACT CTCCGCTCCG
TTGCGGACAG CCTTGCTCGC GATTGTACGG GACTACGCGA GCCGGAATCA CTCGGTCCTC
GTCGTGGCCT CCAACCAATC CCCCGAACGC TTCCATTTGC ATCGGGAGAA CGACTACGCT
GTCGACGATG ATATTCGCAA CGATACACTC TGGTACGGAA ATATGCGAAT CTGGCAACGC
TATCAACAGA CAGCTCGAAG AACCGGGACG GTCGTCTTGG AAACGAATCT GGACGCCGAC
GATGGACTGG CGATCGATTT TGTACACACC GTACAACAAC GTGCACTCCG AGACTTTCGG
ACAACACCAC CCCCAACGGC CGAGTCCGTG ATTGGACTCC GTCGCTTGTA CCGCATCTAT
TGTGTGGGAC AACATGTCGA ATGGCACTTT TACGCACCCT GGGATCGTCG ATTGTTCGAC
AAAATACCCG ACTACGTCAT TCAAGGAGCC TTGCGGACAC GGATCAATGA TCGTATTTGC
ATCACACCCG GACTCACGGT AGCCTCCCAA ACCGTGCCGG ACTCTCACGT GGCTGCTACT
ACTCCTACTG CTACTACAAC TGCTACGGGT ACAGTAAACA CAACTGCTAC TGCTACTACT
GCTCCCAACA CCGCCACCAT ACCAACACCA CCAACGTCAT CCCCACCACT ACTACCCTTT
GACGTCGTAC GTTGGCATCA TCTCATTCAA GAAAAATTTG CAGCCTGTGA ACAGACATCC
CCTTCTCAGC TCCTCGACTT TCACAGGGAA ACATTTGTCT CCATGTCATC GGTCTGTTAC
GAATACCTCG ACAACAGTTT GGATACGGGT AATGTGACCG AAATATTACC TACCGCACGG
CACCCTTGGG CCATCCGCGC ACGTACACCT ACCAGTGTCG GGGTCGAGGA TCTACTCCGC
AAACGATCGC GTTGGAAATA TTCCGACTAC TCGGCCTCGC AAGCGCTGTG GACCCAATTG
TCGCCAATAT TCAGCGTAAC GGCGGAAAGT CTACGGCAGA CGCACCACGC TTTGGCGGAT
GATCTCATCG CCATTCTATC GGACGCCATA GAAGGGCAGT GTACCCCCAA TCACTCGTGT
CACGACAAGT CCCGAACCAT TTTAAACCGG GTACTCCAAA ACGAAAAGAA ATACGGCCAG
CTCGTCGTGC CGGATAAACT CGTTTGGGAG CAGTAG
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| Protein sequence | MGDRDVPHWD SQYPSIGSLP GRGVASRNDP QGGNYRFLED SRVILFVWSQ NCISLLPLPC
PYTAMGVEWS AQFFPQPRSR NSRLTNNATG TTSQRTGNRT RSMIPLVRGM RGKAVVGLVT
MGLVWTWRSL RWADEGILSV AGNPLSHPLA GVSIPLPTSY PVQVLLHVIH TRFQQHQPRL
VHLGRARLAL FRTLCVPSLR AQTETNFLWI LRVDPALSAP LRTALLAIVR DYASRNHSVL
VVASNQSPER FHLHRENDYA VDDDIRNDTL WYGNMRIWQR YQQTARRTGT VVLETNLDAD
DGLAIDFVHT VQQRALRDFR TTPPPTAESV IGLRRLYRIY CVGQHVEWHF YAPWDRRLFD
KIPDYVIQGA LRTRINDRIC ITPGLTVASQ TVPDSHVAAT TPTATTTATG TVNTTATATT
APNTATIPTP PTSSPPLLPF DVVRWHHLIQ EKFAACEQTS PSQLLDFHRE TFVSMSSVCY
EYLDNSLDTG NVTEILPTAR HPWAIRARTP TSVGVEDLLR KRSRWKYSDY SASQALWTQL
SPIFSVTAES LRQTHHALAD DLIAILSDAI EGQCTPNHSC HDKSRTILNR VLQNEKKYGQ
LVVPDKLVWE Q
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