Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39554 |
Symbol | |
ID | 7195232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | - |
Start bp | 112528 |
End bp | 113346 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183678 |
Protein GI | 219126885 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.324652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCA TCGCTTTCGT TGCCCTGGCT TTCGCCTTTA CCTCTGCGAC AGCAGTAGAC GTCAGTGTCA AAGTTCTCGG CATACACGAA AATAGAGGAC TATGCCACAA CGATATGGAT GTGATCAATT CGCGCGTCCA AGGTGCATTG AACAACATCC TGGAAGCCCA CGAGCTCGAT GCCATCGGAG AGTTTGACAC GGACACAAAC GACGATGGCC GAATGCTCCG CAATTCACGC GCCAATAGTC TCTGCAACTG TCGCATCAAC AGATCATTGT GCTTCATGTT TTGTTCACCG TCGCAGCGCT TCAATCGTCG CGCGCGGGAT GTAGAAAACA AAGAAGATCG CGAGCTTACA TCTTCCTCTA TCTTTGCTGA TGATGAAAAG AGCTCCAAGG ACGACTCTAA GGACTCTAAG GACTCCAAGG ACAACTCTAA AGACTCCAAG GACGACTCTA TAGACTCCAA AGACGACTCC AAGGACTCCA AAAACGACTC CAAGGACGAC TCCGAAGATC CCAAGGAATT TCTTGCGGAA GAAGATGACG AGTTCCTGGA CGGAACAAGC GAGAAGCAGA CGAATGGAGA GGAGGATTTG GAAATGGACT TGGACCTGCC AGCTCTTACC AAAACTCTGG CGAATGCGCC CTCAGATTTG TCTCTATCAG AGCAAATCGA GAATGACATC ATAGAAGTTA TTCCTGCTGT CTACCTGGCC CTCGCTTACA ATGACGACAT AGGACTGGGA TGCCAACTGA CTCTCCGCAA AATGATTCGA CACAGGGAAC TCGAAGTGTA CGCTTCTGTG GATGCATAA
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Protein sequence | MNTIAFVALA FAFTSATAVD VSVKVLGIHE NRGLCHNDMD VINSRVQGAL NNILEAHELD AIGEFDTDTN DDGRMLRNSR ANSLCNCRIN RSLCFMFCSP SQRFNRRARD VENKEDRELT SSSIFADDEK SSKDDSKDSK DSKDNSKDSK DDSIDSKDDS KDSKNDSKDD SEDPKEFLAE EDDEFLDGTS EKQTNGEEDL EMDLDLPALT KTLANAPSDL SLSEQIENDI IEVIPAVYLA LAYNDDIGLG CQLTLRKMIR HRELEVYASV DA
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