Gene PHATRDRAFT_39554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39554 
Symbol 
ID7195232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp112528 
End bp113346 
Gene Length819 bp 
Protein Length272 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183678 
Protein GI219126885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.324652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA TCGCTTTCGT TGCCCTGGCT TTCGCCTTTA CCTCTGCGAC AGCAGTAGAC 
GTCAGTGTCA AAGTTCTCGG CATACACGAA AATAGAGGAC TATGCCACAA CGATATGGAT
GTGATCAATT CGCGCGTCCA AGGTGCATTG AACAACATCC TGGAAGCCCA CGAGCTCGAT
GCCATCGGAG AGTTTGACAC GGACACAAAC GACGATGGCC GAATGCTCCG CAATTCACGC
GCCAATAGTC TCTGCAACTG TCGCATCAAC AGATCATTGT GCTTCATGTT TTGTTCACCG
TCGCAGCGCT TCAATCGTCG CGCGCGGGAT GTAGAAAACA AAGAAGATCG CGAGCTTACA
TCTTCCTCTA TCTTTGCTGA TGATGAAAAG AGCTCCAAGG ACGACTCTAA GGACTCTAAG
GACTCCAAGG ACAACTCTAA AGACTCCAAG GACGACTCTA TAGACTCCAA AGACGACTCC
AAGGACTCCA AAAACGACTC CAAGGACGAC TCCGAAGATC CCAAGGAATT TCTTGCGGAA
GAAGATGACG AGTTCCTGGA CGGAACAAGC GAGAAGCAGA CGAATGGAGA GGAGGATTTG
GAAATGGACT TGGACCTGCC AGCTCTTACC AAAACTCTGG CGAATGCGCC CTCAGATTTG
TCTCTATCAG AGCAAATCGA GAATGACATC ATAGAAGTTA TTCCTGCTGT CTACCTGGCC
CTCGCTTACA ATGACGACAT AGGACTGGGA TGCCAACTGA CTCTCCGCAA AATGATTCGA
CACAGGGAAC TCGAAGTGTA CGCTTCTGTG GATGCATAA
 
Protein sequence
MNTIAFVALA FAFTSATAVD VSVKVLGIHE NRGLCHNDMD VINSRVQGAL NNILEAHELD 
AIGEFDTDTN DDGRMLRNSR ANSLCNCRIN RSLCFMFCSP SQRFNRRARD VENKEDRELT
SSSIFADDEK SSKDDSKDSK DSKDNSKDSK DDSIDSKDDS KDSKNDSKDD SEDPKEFLAE
EDDEFLDGTS EKQTNGEEDL EMDLDLPALT KTLANAPSDL SLSEQIENDI IEVIPAVYLA
LAYNDDIGLG CQLTLRKMIR HRELEVYASV DA