Gene PHATRDRAFT_39546 details

Gene Information

• Locus tag: PHATRDRAFT_39546
• ID: 7195362
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: +
• Start bp: 98428
• End bp: 98994
• Gene Length: 567 bp
• Protein Length: 188 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002183549
• Protein GI: 219126617

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGTCA GGTTTAGGCT TCCCATTAGG TCCTACAGCG AGAATGATGC CGTTCGTGCA 
AACTCGCTAG CTCCTCCGAG ATCTAATGTA ACAAACTTTT CCCCTCTTCC TCATTTTCAT 
TGTGGTCCTC CTACGATCCC TTCGGCGACC ATCATCTCGG AGAAGACAAC CGCCGCCCGT 
CCTATACTCC GGCGTGGCGC TGTCAGCTCC TCATATTTAT TGCGAGACGC AATGATCGCT 
GCCTCAGCCA TTGACTCGTA CGAGTTCACT AGGCAGGAAA CGTATTCTTG TGACTATCTT 
TACTCTGCCG CCTGTCTTGA CCAGAAAGGC GACGCTACTC TATCTCCGGG TAAACGAAAT 
TTTGCAGAAC AAGAGGAGGA CGACATGACG GATGTCTCTA CTTGTTATAG GAGCACTTGT 
TCTACTTCAT CACAACGTCG AAGAACTGAT TCTGGTATGT GGAGTGACTG TGACTCCTCC 
GTTTCCTCGA TGAATACGTC GACTGCGCAT ACCGAAAGTG AAAGCACACG GATCGTTAAA 
GATCTGATGG AAATAGAGGA CCGGTAG 

 

Protein sequence

MPVRFRLPIR SYSENDAVRA NSLAPPRSNV TNFSPLPHFH CGPPTIPSAT IISEKTTAAR 
PILRRGAVSS SYLLRDAMIA ASAIDSYEFT RQETYSCDYL YSAACLDQKG DATLSPGKRN 
FAEQEEDDMT DVSTCYRSTC STSSQRRRTD SGMWSDCDSS VSSMNTSTAH TESESTRIVK 
DLMEIEDR