Gene PHATRDRAFT_39529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39529 
Symbol 
ID7195353 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp63049 
End bp63861 
Gene Length813 bp 
Protein Length130 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183665 
Protein GI219126858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTCCG GCGCGATGTA CGAATTTCTC TTCTCGTACA AGTCTACACA AACGCTCCCA 
GGGATTCCGA CGTCTGGCGT GCCACGAAAC TGGCGCGGAC CTCTCGGCGC GCAAGAATGG
GCCGTGCGCC GTACGGATCG GAATCAGTGG GAAGATGGGC TCGTGTTCCT CTGTACGTCT
GTAAGTCCAC CGTAGGACGC CTGGCATGCG ACCGATCGCG TTCGGGCACG TCACTGCTTT
CGTCACGTCA ATTTCGGGTT CCCCTCGGGT CTCCGGACCA TGGGCTCGGC GCTGCCGCTG
CGGAGATCGC AACACCTCTG GATTCGACGC GACTCTTCAG ACTTTCTCGT CGCATACCCT
TTGGAACGTA TCATTGTCGT CACCATTACT ATGAGCGGAA AGCCTGTTAC TACCTTTTGG
CGCATGGCCG GCATGTCGTA TTTGCAGGTA AGAAAACGGG GGAACATCGA GTATCAATCA
AAAAAGTGGA TCGGCAAGGA AATAGTGATC CAAGCGACCC TCCCTGCAAT CGCCCGGATC
AATACTGCCA TTGCTGTGGC ACCTCTGGAA TCAACAAACG AAAAAAACGC GCGCAATCTC
TCTCTTTTTT CTTGTTGTAA ACTAACATTA TTATTGTCTC TGCAGTACGT CAACAAGGCC
GCCACTTCTA TGCGTGGAGC CCTCAAGGAA CCCGCACAAC GAAAAGCCAT GGAGCAAGAA
GCCTTTGCGT ATAAGGTCAG TACCTGGCAA GATGGCAAGC AAAGTCCCAA GGTGCCGGTG
GATGTGCTGG CTCAATCCGG CGCGACGTCG TAA
 
Protein sequence
MQSGAMYEFL FSYKSTQTLP GIPTSGVPRN WRGPLGAQEW AVRRTDRNQW EDGLVFLCTS 
PVTTFWRMAG MSYLQYVNKA ATSMRGALKE PAQRKAMEQE AFAYKVSTWQ DGKQSPKVPV
DVLAQSGATS