Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39529 |
Symbol | |
ID | 7195353 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | - |
Start bp | 63049 |
End bp | 63861 |
Gene Length | 813 bp |
Protein Length | 130 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183665 |
Protein GI | 219126858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTCCG GCGCGATGTA CGAATTTCTC TTCTCGTACA AGTCTACACA AACGCTCCCA GGGATTCCGA CGTCTGGCGT GCCACGAAAC TGGCGCGGAC CTCTCGGCGC GCAAGAATGG GCCGTGCGCC GTACGGATCG GAATCAGTGG GAAGATGGGC TCGTGTTCCT CTGTACGTCT GTAAGTCCAC CGTAGGACGC CTGGCATGCG ACCGATCGCG TTCGGGCACG TCACTGCTTT CGTCACGTCA ATTTCGGGTT CCCCTCGGGT CTCCGGACCA TGGGCTCGGC GCTGCCGCTG CGGAGATCGC AACACCTCTG GATTCGACGC GACTCTTCAG ACTTTCTCGT CGCATACCCT TTGGAACGTA TCATTGTCGT CACCATTACT ATGAGCGGAA AGCCTGTTAC TACCTTTTGG CGCATGGCCG GCATGTCGTA TTTGCAGGTA AGAAAACGGG GGAACATCGA GTATCAATCA AAAAAGTGGA TCGGCAAGGA AATAGTGATC CAAGCGACCC TCCCTGCAAT CGCCCGGATC AATACTGCCA TTGCTGTGGC ACCTCTGGAA TCAACAAACG AAAAAAACGC GCGCAATCTC TCTCTTTTTT CTTGTTGTAA ACTAACATTA TTATTGTCTC TGCAGTACGT CAACAAGGCC GCCACTTCTA TGCGTGGAGC CCTCAAGGAA CCCGCACAAC GAAAAGCCAT GGAGCAAGAA GCCTTTGCGT ATAAGGTCAG TACCTGGCAA GATGGCAAGC AAAGTCCCAA GGTGCCGGTG GATGTGCTGG CTCAATCCGG CGCGACGTCG TAA
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Protein sequence | MQSGAMYEFL FSYKSTQTLP GIPTSGVPRN WRGPLGAQEW AVRRTDRNQW EDGLVFLCTS PVTTFWRMAG MSYLQYVNKA ATSMRGALKE PAQRKAMEQE AFAYKVSTWQ DGKQSPKVPV DVLAQSGATS
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