| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_3676 |
|---|
| Symbol | |
|---|
| ID | 7195356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011688 |
|---|
| Strand | + |
|---|
| Start bp | 78178 |
|---|
| End bp | 79119 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183543 |
|---|
| Protein GI | 219126604 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.845597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCCA TTGCGCTGTA TCTAAGTGTG GCTGTCATGG CGTTTTCCTT CGTCTTTGAT
CATTGGACAA TAGTCGATAG CATGTATTTT GCCGTCGTGA CGTTCACGAC TATCGGATAT
GGCGATTTGA CCCCAGATAC GTACGCGGGA CGGATCTTTA CCTGCATCTT CGCTCTCAGC
GGGGTCGCTT GCCTAGGTAT CGCTCTCGGT GTGATTGGGA ATCATATCAT TGAAGCACAA
GAAACGGCCG TATCACAAAC TTCCGCACTC GCCAAAGCCC GTGTATTGAC ACTCTTTTCG
AGCTCTACCC ACATAGTGGA CCACGTCCTC GAAGACCCTG AAACGGGGGA AGACTACGAT
CCCGATTTGT CTGCTTTTGC GCGGCACAAA GATGCTACTC CGACGTCCAC ATTTGGATGC
TTGTCTAGGT TTACAGTTTC GTTGCAGTGT TGGAGGCTGT TATGGGAATT GGTTGTCGTG
TTGGCCCTGG TCTCATTTTT TGTCGCACTC GTTGCCAGCG ATCCCGGTAT TGATACGACC
AAATGGGGCG ATGGCTTATA CTACGCAATT ATCACTGCCT GTACGGTTGG CTATGGTGAC
TTTGCACCAT CGTCGCAAGC CGGGCGAGCT CTAGCTATTG TCTTCATTCC TTTGGCCGTC
GGTGCCATGG GACATTTTCT TTCTATCGTC GCCAACTGGA TGATTGAAGG TCGTCAACAG
CGCTTTCACA AACACATGCA GGCCAAGGAA CTTACGATGC AAGACTTAGA GGTAATGGAT
GAAGATGGAG ACGGAAAAGT TACGCGAGCG GAGTTTATGG AATTCATGCT GGTCGCCATG
AACGCTATTG ATCAATCGTT GATTGATGAA TTACGCGATC ATTTTAGACA TCTTGATCAA
GATAATTCGG GGTCTTTAAG CCGGCAGGAC TTGATTGCGG CG
|
|---|
| Protein sequence | MIAIALYLSV AVMAFSFVFD HWTIVDSMYF AVVTFTTIGY GDLTPDTYAG RIFTCIFALS
GVACLGIALG VIGNHIIEAQ ETAVSQTSAL AKAHATPTST FGCLSRFTVS LQCWRLLWEL
VVVLALVSFF VALVASDPGI DTTKWGDGLY YAIITACTVG YGDFAPSSQA GRALAIVFIP
LAVGAMGHFL SIVANWMIEG RQQRFHKHMQ AKELTMQDLE VMDEDGDGKV TRAEFMEFML
VAMNAIDQSL IDELRDHFRH LDQDNSGSLS RQDLIAA
|
|---|
| |