Gene PHATRDRAFT_30092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30092 
Symbol 
ID7195316 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp507074 
End bp508008 
Gene Length935 bp 
Protein Length147 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183617 
Protein GI219126759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0588671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAAGTCTCT TAAGAGGGTT CGAAAAGCTG GAGTCGCTGC GGTCATCAAG CAAAGCGAAA 
CCCTCATATT TCTCTCTCCA TGCCTATAAC AGAAACTTTT TCTCGTTCCG CTATAAAATG
TCCAAGCGTT TGCTGAAAGT GAGTACCCGC GGGTTGAATG CTATGTCGTG ATTTGCCTCA
TTTGATTGTG GAGTAGTGAC ATCTTTCGTG GTGACTAGCA AACCCACTTT GCTTTCTCGT
CGGTGAAATA TGACATCCCT GGAGACTAAA AAGGTTCATT GACTTTTCCA TCCTGAAAAC
CCGCGGTGTG TCGACTCAAC AAGTCGTGAA CTTTGTTGGT GCATCATATG GGCTAATTGA
ATTGACCGTT ATCCCTCTTT TGTGAATGCA GGAGCACAAA TCTTTGGCGG AATCCCCTCT
TGACTTCGTA GTCGACTTTG AGATTGTCGG GGATGATTTA TTTCAATGGC GTTGCACAAT
GCTGGGACCA GACGACTCCC CATACGCTGG TGGAAGGTTT GTCGTCCGCT TGGAATTTCC
AACGACCTAC CCCTTCAAGC CTCCAAAATT AGTCTTCGAG ACAAAAGTTT ACCATCCCTC
CGTAACACTC GAGACAGGGG AAGTATGTGG TGCTGTTCTT GGCCAGTGGG GGCCTACATT
GAATGTCCAG CATTGCTTGC TTACTCTATA TAGTCTTTTA CAAGATCCAC AGCCCGATCA
TCCTCTCGAA GACGACATTG CACAGCAGCT TGCAAAGAAG CCAAAGGACT TTGAGAAGAC
GGCGAGAAAA TACACGAAAG ACTACGCCAA GTAAAAACAT TCTGTGGCAC GACCCCACAG
CTAGAGACAC TTCGAACGTC CTCTATTTAT GCGCAATTTA GAGAGGGCCA TTTGCAAATA
CATTAATGCT TAACCTGACA CTTACTGTTA GCACC
 
Protein sequence
MSKRLLKEHK SLAESPLDFV VDFEIVGDDL FQWRCTMLGP DDSPYAGGRF VVRLEFPTTY 
PFKPPKLVFE TKVYHPSVTL ETGEVCGAVL GQWGPTLNVQ HCLLTLYSLL QDPQPDHPLE
DDIAQQLAKK PKDFEKTARK YTKDYAK