Gene PHATRDRAFT_30040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30040 
Symbol 
ID7195268 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp281653 
End bp283629 
Gene Length1977 bp 
Protein Length477 aa 
Translation table 
GC content47% 
IMG OID 
Productglucose-6-phosphate dehydrogenase 
Protein accessionXP_002183714 
Protein GI219126961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTCGAGACA CCGAAGAACA TCTTTGCGAA ACGTCCACAC CCCCAACTGT AGGAGATTTT 
GCGCAATGCA GAAAGACGGA GGCTTTTGCA GGTCCTCTAG GGTCGTGCCG ACACAAATTC
CTGGGCAAAT TCCCCCCAGT CAAGTCGATT TCCTGAATCA AGTGCAACGC GAGAAATGGC
ACAAGGTAAA TGGAAAAGTG ATTGCACTGG TCAGCGACGG AATCGAATAA TATTATTGCC
GTTCCGGACA CCAACCAATT CTTACTAGGA GCAGTAGTAT GCGGATGAAT CGCATTCCTT
TCAACTCTAA AGAGTGTTCT CCACTGAGTT CTCCCGACTG CGATGAACCG TCGCCATCAC
CGTCCGGATC CCCATACTCT TTGTTGTCGA CTATATCTGT AGCACCTGCC TAACTTTGAC
CATAAGAAAA AGAAATGCAC GGACTATAAA TCGGCTATTC GCTACCTCAT GATAATTTGC
AGTCTCACTT TTTGCTTCTG CTCCGTTGTC AACGACGCGA AGGAAAGCGT AACGATCCTT
GTTGTGGGAG CTTCGGGAGA TCTCGCGAAG AGGAAGACCT ACCCTGCACT TTTGGCTTTG
TACAAGGCGA GTCTTTTGCC GTCAGTAACA ATCATTTGGG GCTTCGCGCG GACCGAAATG
ACTCATTACG GTTTCCGTCA TCACCTGAAA CCTTTTCTCA ACGATGCTGA CGAATGCGTA
GTCGATCAAT TCCTTTCTAT CTGCAACTAT CGACCCGGTT CGAGTTATGG CGACTGGGAA
AGCATGGACT CTATTCTGAA AGCATCACCC TCAAGGAACC TTGTTGTCTA CCTAGCAACT
CCGCCGAACG TGTTTGCACA GTCTGCCGCA GTTCTGAAAA AAACGCTTAC CCTAACACCG
ACAAATGGTT TCGTCCGTCT TGTCTTGGAG AAGCCATTTG GAAGTGATAC AGAAAGTTGC
GAAACGCTGC TACGAACATT GAACAACCAG GAATGGTTGG AGCAACAACT GTATCGTATT
GATCATTATC TTGGTAGGTG TCGCGACAAT CTTTCATCTC AATGAAATTT CTAGATCTAA
CAAGACGCTT CTACATTTTA GGAAAAGAAA TGGTTCAGAA CATACTTACT CTGAGGCAGC
AAAATCGCTG GCTGAACTCT CTTTGGAATA AGGATGCCGT GAAATCGGTA CATATTATTT
GTAAAGAATC TTTTGGAACA GATGGTCGCG GCGGTTACTT TGACCGCTAC GGCATCATAC
GAGACATATT CCAGAACCAT TTATTGCAAC TGTTGACTTT AGTCGCCATG GATATGCCGG
AAAAATCTTG TGCAACTAAA CTTCGAAATG CAAAACTGGA AATTTTGAGA AAGATACCTG
TTATAAATCT AGAGGACTGT CTTTTTGGCC AGTACGAGGG CTATAAAGAC GACTCCTCGA
TTGAAAATCG AGATACAGTC ACTCCAACCT ACGCTTGCAT TCGCACCTGG GTACATAATG
AGACGTGGAG GAATGTGCCC TTCGTCCTCG AAGCCGGGAA AGCGTTAAAC GATCGACTGT
GCGAGATAAG ACTTCATTTT CGAGGCGTAA AAAACGGTCA GCCGAACTCA CTCGTTTTAC
GGCTTCAACC TGTTCCGACA ATTTTTCTGA CGGCTAATGT GAAAACCCCT GGATTTTCCT
ACAATCCTGT AAGTGCGCGC ATGCAAGTCG ACTATGGACA GGCTCTGATG CCTGACGCAT
ACACTCGTCT ACTACTCGAT GTGTTTCGAG GGAAGCAGGC AAATTTTGTT CGGGATGATG
AACTCCTGGC GAGCTGGAAG ATATTCACGC CGATCCTGAA CCAAACTGAG CAATTGAACA
TAGTACCTGA ACCGTACATG CGAGGATCCA CTGGTCCCGA CAAGAGGGTA GAGTTTCTGA
GATCAGTTGG AGCTATCCCA TCATGGTCAC CTCCTCCGTC TGCACTTTGA CGCGAAC
 
Protein sequence
MIICSLTFCF CSVVNDAKES VTILVVGASG DLAKRKTYPA LLALYKASLL PSVTIIWGFA 
RTEMTHYGFR HHLKPFLNDA DECVVDQFLS ICNYRPGSSY GDWESMDSIL KASPSRNLVV
YLATPPNVFA QSAAVLKKTL TLTPTNGFVR LVLEKPFGSD TESCETLLRT LNNQEWLEQQ
LYRIDHYLGK EMVQNILTLR QQNRWLNSLW NKDAVKSVHI ICKESFGTDG RGGYFDRYGI
IRDIFQNHLL QLLTLVAMDM PEKSCATKLR NAKLEILRKI PVINLEDCLF GQYEGYKDDS
SIENRDTVTP TYACIRTWVH NETWRNVPFV LEAGKALNDR LCEIRLHFRG VKNGQPNSLV
LRLQPVPTIF LTANVKTPGF SYNPVSARMQ VDYGQALMPD AYTRLLLDVF RGKQANFVRD
DELLASWKIF TPILNQTEQL NIVPEPYMRG STGPDKRVEF LRSVGAIPSW SPPPSAL