| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_30019 |
|---|
| Symbol | |
|---|
| ID | 7195250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011688 |
|---|
| Strand | + |
|---|
| Start bp | 205931 |
|---|
| End bp | 207088 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183570 |
|---|
| Protein GI | 219126661 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0257867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGGACTCCTG GACTCCTTGA ATTATTGACT CTGTTTTCTA CAGCGCAGAA GAAAGCAAGC
AAGGCTCAGT ATTTCCATTA TTAGCGTCTG TCGCGTGTGG TCTGGCTTAC AATGAAGTTA
GATCCTACTG TTTTGCGTAC CATGAGCAAA GAGGACTTTC GAGTTCTCGA AGCTGTAGAA
AAGGGCATGA AAGATCATGC TTTGGTGCCA TTGCCACTTA CAACTTCCAT TGCCAATCTG
CGACACGGAG GGGCCCACAA AATAGTTTCC AGTCTATTAC GTGATAAGCT ATTGAGTCAT
GAGCGAACAA AGAACGGATA CGATGGATAC CGTGTTACGA ATGCTGGATA CGATATTTTG
GCGCTCCAGA ATCTCAAAGC TAGGAAAATT GTCGCTGCTC TCGGTCAGCG GATCGGCACC
GGAAAAGAAA GCGACGTCTA TCTTGCGGTC GATCTTTCGG GTCAACAAAT TGTGTTGAAA
TTTCACCGAT TGGGTCGAAC GTCTTTTAGA AACGTCAAGA AGAAGCGGGA CTATTTTGGA
AACGCTGCAC AACAAGCGCA TTCCTGGCTG TTTCTTAGCA CACTTTCGGC TTTGAAAGAG
TTCGCTTTTA TGAAAGCACT TTACGATGTT CATTACTCTA CACCGGTACC GATTGCACAC
AATCGACATA TTGTCGCCAT GGGCCTTGTC CGTGGCGTCC CTCTATATCA AGTTTTTCCA
AAACAGCTTT CTGCGGAGCA GGCGGCCGAC ATTTATGAGC AGGCGATTGC TTTGGCGGCT
CGGTTAGCTA AACACGGGCT CGTCCATTGT GACTTGAATG AATTTAACCT ACTGGTTGAT
TTATCCGGTA TACAGTCACT CGCTACATCA GGTGATGATC CTTACATAAG ACACTCGGGT
ATGTCTGTCG CTGGAGAAAA GTCGGTAGGT GCCCTTTCCA AGCCTGCGTG GGAACAGTCA
CTGGAGGAGG GCGATAAGAT TGCTGAAGTT TTGCCAGAAC CGATCGCCCG TCTGGATAAT
GGCGATCCGA AACCGGTTGT GACGTTAATT GACTTTCCTC AAATGATTTC TACGAAGCAT
CCGAATGCTC AGGAGTTGTA TGAGCGAGAC TTGGCATGCC TGCGAAGATT TTTTGAACTG
AAAATTCAGT GCACTATA
|
|---|
| Protein sequence | MKLDPTVLRT MSKEDFRVLE AVEKGMKDHA LVPLPLTTSI ANLRHGGAHK IVSSLLRDKL
LSHERTKNGY DGYRVTNAGY DILALQNLKA RKIVAALGQR IGTGKESDVY LAVDLSGQQI
VLKFHRLGRT SFRNVKKKRD YFGNAAQQAH SWLFLSTLSA LKEFAFMKAL YDVHYSTPVP
IAHNRHIVAM GLVRGVPLYQ VFPKQLSAEQ AADIYEQAIA LAARLAKHGL VHCDLNEFNL
LVDLSEPIAR LDNGDPKPVV TLIDFPQMIS TKHPNAQELY ERDLACLRRF FELKIQCTI
|
|---|
| |