Gene PHATRDRAFT_22873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_22873 
Symbol 
ID7195227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp93204 
End bp94599 
Gene Length1396 bp 
Protein Length303 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183547 
Protein GI219126613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTAGAAACTG GGTTTGAGTG TTTGTGTTGG TGCTCCCGCA AGCAAAGCGG AGGATGCGCG 
TGCCGTCTCG ATGAAAAGCA AACCCGACGG ACATGCGAGA GAAAAGCATT CCGCCAGGGT
CGTTCGAGTC TCACAGCAAA CACGTACGGT CAAAACGTCA AGACAGTGTG TTTGCATAGG
CACGCATGAT TCATGCGTAC ATACAATGTG CATTATGAAT ACGAGAAACC AGTGCGGCTG
TGTTTGGTCA TTTGCAAGGA GTGTGTGGCG TTGATCTGGT CGTGCGTGTG TGCATGTTTG
TGTACTCTTG CTCGCTCCAG TGTTGGCGTT TTTAGACAAT GCTACAATCC CCTCTCACAC
TTGTACCCAT ACGTGTTCTC TGCAGCAGTT CTACCTACTC TTCATTCCCC CCAACATGTC
CAGTTCTACC GAGTTTCTCG TCAATTTCAT GGCCGGTGGT GTGTCCGGTG CCGTGGCCAA
GACTGCTACA GCACCCATTG AGCGCGTCAA GCTCCTCATC CAGACGCAGG ACGCCAACCC
CAAGATTATC TCTGGAGAAG TCGCCCGTTA CACCGGAATT GTCGACTGCT TCACCCGCGT
CACCAAGGAA CAGGGATTCA AGGCCTTTTG GCGTGGAAAC TTGACCAACA TCATCCGTTA
CTTTCCCACC CAGGCTTTCA ACTTTGCCTT TAAGGATACC ATCAAGGCAA TGTTCCCCCG
GGCCGATAAG AACACCGAAT TCGCCAAGTT CTTTCTCATC AACATGGCAT CGGGTGGTCT
GGCCGGAGCC GGATCCCTCA TGATCGTCTA CCCCCTGGAT TACGCCCGTA CCCGTCTCGC
CTCCGACGTC GGAACCGGCA AGCAGCAGTT CAGCGGACTC ATGGACTGTC TCAAAAAGAC
CGTCGCCTCC AGTGGCGTGG GCGGACTCTA CAACGGTATC GGAGTCAGTG TCGTCGGGAT
CATCCCCTAC CGTGGAGTCT ACTTTGGTCT CTTCGACACC CTCTCGGGAT ACAACCCCTA
CCAAAAGGAC GAGAATGGTC TCTTGCGTGC CGCCTCCAAG TTCGCTTGCG CCCAGAGTTC
CGCCATCTGC GCCGGATACG CCTCCTACCC ATTTGATACC GTCCGTCGTC GTCTTCAGAT
GCAGTCCGAA AAACCCAAGG ATATGTGGGT CTACAAGGGC ACCGCCGACT GCTTTACCAA
GATCGTGGCC CAAGAAGGAG CCGGAGCGCT CTTCAAGGGA GCCGGCGCCA ACGCACTCCG
TACCGTCGGA GCCGCCATGG TCCTGGTTCT CTACTCCGAA ATCACCGCCG CCTTTAACGA
CAAATAAGTA CGGGACGTAC CCTGAGAAAA ATACCCGATA CGAACGTTTA CCTAAGACCA
AATCATTTGT GATTTC
 
Protein sequence
MSSSTEFLVN FMAGGVSGAV AKTATAPIER VKLLIQTQDA NPKIISGEVA RYTGIVDCFT 
RVTKEQGFKA FWRGNLTNII RYFPTQAFNF AFKDTIKAMF PRADKNTEFA KFFLINMASG
GLAGAGSLMI VYPLDYARTR LASDVGTGKQ QFSGLMDCLK KTVASSGVGG LYNGIGVSVV
GIIPYRGVYF GLFDTLSGYN PYQKDENGLL RAASKFACAQ SSAICAGYAS YPFDTVRRRL
QMQSEKPKDM WVYKGTADCF TKIVAQEGAG ALFKGAGANA LRTVGAAMVL VLYSEITAAF
NDK