Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_22873 |
Symbol | |
ID | 7195227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | + |
Start bp | 93204 |
End bp | 94599 |
Gene Length | 1396 bp |
Protein Length | 303 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183547 |
Protein GI | 219126613 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTAGAAACTG GGTTTGAGTG TTTGTGTTGG TGCTCCCGCA AGCAAAGCGG AGGATGCGCG TGCCGTCTCG ATGAAAAGCA AACCCGACGG ACATGCGAGA GAAAAGCATT CCGCCAGGGT CGTTCGAGTC TCACAGCAAA CACGTACGGT CAAAACGTCA AGACAGTGTG TTTGCATAGG CACGCATGAT TCATGCGTAC ATACAATGTG CATTATGAAT ACGAGAAACC AGTGCGGCTG TGTTTGGTCA TTTGCAAGGA GTGTGTGGCG TTGATCTGGT CGTGCGTGTG TGCATGTTTG TGTACTCTTG CTCGCTCCAG TGTTGGCGTT TTTAGACAAT GCTACAATCC CCTCTCACAC TTGTACCCAT ACGTGTTCTC TGCAGCAGTT CTACCTACTC TTCATTCCCC CCAACATGTC CAGTTCTACC GAGTTTCTCG TCAATTTCAT GGCCGGTGGT GTGTCCGGTG CCGTGGCCAA GACTGCTACA GCACCCATTG AGCGCGTCAA GCTCCTCATC CAGACGCAGG ACGCCAACCC CAAGATTATC TCTGGAGAAG TCGCCCGTTA CACCGGAATT GTCGACTGCT TCACCCGCGT CACCAAGGAA CAGGGATTCA AGGCCTTTTG GCGTGGAAAC TTGACCAACA TCATCCGTTA CTTTCCCACC CAGGCTTTCA ACTTTGCCTT TAAGGATACC ATCAAGGCAA TGTTCCCCCG GGCCGATAAG AACACCGAAT TCGCCAAGTT CTTTCTCATC AACATGGCAT CGGGTGGTCT GGCCGGAGCC GGATCCCTCA TGATCGTCTA CCCCCTGGAT TACGCCCGTA CCCGTCTCGC CTCCGACGTC GGAACCGGCA AGCAGCAGTT CAGCGGACTC ATGGACTGTC TCAAAAAGAC CGTCGCCTCC AGTGGCGTGG GCGGACTCTA CAACGGTATC GGAGTCAGTG TCGTCGGGAT CATCCCCTAC CGTGGAGTCT ACTTTGGTCT CTTCGACACC CTCTCGGGAT ACAACCCCTA CCAAAAGGAC GAGAATGGTC TCTTGCGTGC CGCCTCCAAG TTCGCTTGCG CCCAGAGTTC CGCCATCTGC GCCGGATACG CCTCCTACCC ATTTGATACC GTCCGTCGTC GTCTTCAGAT GCAGTCCGAA AAACCCAAGG ATATGTGGGT CTACAAGGGC ACCGCCGACT GCTTTACCAA GATCGTGGCC CAAGAAGGAG CCGGAGCGCT CTTCAAGGGA GCCGGCGCCA ACGCACTCCG TACCGTCGGA GCCGCCATGG TCCTGGTTCT CTACTCCGAA ATCACCGCCG CCTTTAACGA CAAATAAGTA CGGGACGTAC CCTGAGAAAA ATACCCGATA CGAACGTTTA CCTAAGACCA AATCATTTGT GATTTC
|
Protein sequence | MSSSTEFLVN FMAGGVSGAV AKTATAPIER VKLLIQTQDA NPKIISGEVA RYTGIVDCFT RVTKEQGFKA FWRGNLTNII RYFPTQAFNF AFKDTIKAMF PRADKNTEFA KFFLINMASG GLAGAGSLMI VYPLDYARTR LASDVGTGKQ QFSGLMDCLK KTVASSGVGG LYNGIGVSVV GIIPYRGVYF GLFDTLSGYN PYQKDENGLL RAASKFACAQ SSAICAGYAS YPFDTVRRRL QMQSEKPKDM WVYKGTADCF TKIVAQEGAG ALFKGAGANA LRTVGAAMVL VLYSEITAAF NDK
|
| |