Gene PHATRDRAFT_15625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15625 
Symbol 
ID7195286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp361150 
End bp362157 
Gene Length1008 bp 
Protein Length335 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183598 
Protein GI219126719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCCTTACGG ACACTTTCCA ACGCCAACAC ACCTACCTGC GGCTTTCCTT AACAGAACGC 
TGTAACTTAC GGTGTACATA CTGCATGCCC GAAGCGGGTG TTCCGCTGCA GCCCGCCTCG
CATTTATTAC AAACCCCGGA GCTGTTGAAT ATTGCGACGT ACTTTCGTCA GGCAGGCGTC
ACGAAGTTTC GTCTCACGGG TGGGGAACCG ACACTACGGA AAGACTTGCT CGATGTGGTG
AAAGGCTTAA AGAGACTGGA TCCGCATCAA ATTGGGATGA CATCAAATGG AATCAAGCTA
CACAAGGAAC TGCCTGATTT GGTCGAAGAA GGGCTGGATT CTCTTAACAT TTCACTGGAC
ACTGTCGATG CTGATAAGTT TGCAACGCTG ACAAGGCGCC CGGCAGCTTA TCTTGATCGG
GTATGGCAAA GTATCGACGT TGCGCACGAC TTGTTAAAGG ATCATGGATC GGTCAAACTG
AATTGTGTCG TCATGCGTGG TACCAACGAC GACGAGGTTG CCAACTTTAT TCAACTTACC
GAAACGTATC CAGCTCTATC GGTCCGGTTC ATTGAGTACA TGCCCTTTTC CGAAAATGGT
TGGAATTGGG ACAAGTGTGT CCCGTATCAA GAGCTACTTG ATCAGCTAGA GACGGGTATG
TTGAAAGCTG TGCCGGTAAA AGATCCTCAC GACACTACTA AATGGTTTCG AACCGCCTCG
GGGGGTAAGA TTGGTTTCAT CACCAGCATG AGCTCACATT TTTGCGCGGG GTGCAACCGC
ATTCGATTGG CGGCCGACGG GAGTCTCAAG GTATGTCTGT TTGATGGTGT AACGGAGATC
TCACTGCGGG ACGCAGTCCG GGACTACGAC TTTACTGATA CGGAGTTGGG CAAACTTGTG
CATTACGCGA TTCAAAAGAA AAAATTTTCT CTTGGCGGAC ACAAGGATCC ACAAGACATT
ATGAACGATG CGGCCAACAA CAGACCCATG ACGCTGATCG GAGGATAA
 
Protein sequence
VLTDTFQRQH TYLRLSLTER CNLRCTYCMP EAGVPLQPAS HLLQTPELLN IATYFRQAGV 
TKFRLTGGEP TLRKDLLDVV KGLKRLDPHQ IGMTSNGIKL HKELPDLVEE GLDSLNISLD
TVDADKFATL TRRPAAYLDR VWQSIDVAHD LLKDHGSVKL NCVVMRGTND DEVANFIQLT
ETYPALSVRF IEYMPFSENG WNWDKCVPYQ ELLDQLETGM LKAVPVKDPH DTTKWFRTAS
GGKIGFITSM SSHFCAGCNR IRLAADGSLK VCLFDGVTEI SLRDAVRDYD FTDTELGKLV
HYAIQKKKFS LGGHKDPQDI MNDAANNRPM TLIGG