Gene PHATRDRAFT_52450 details

Gene Information

• Locus tag: PHATRDRAFT_52450
• ID: 7195018
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: +
• Start bp: 86473
• End bp: 87060
• Gene Length: 588 bp
• Protein Length: 154 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002183287
• Protein GI: 219126068

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AACACGCAGG TCGTTTTGGA CAATCCGACG TGTTTCTTGA ATCCATTCCA ATTCGAAATT 
ACCTTCGAGT GCTTACAAGA ACTGGAAGAT GGTACGTTTC ACAAAATGCA GATGGAGCGG 
AACGCACGGT TCGGCACCTC TCGGATGCCA ACAAAACACC ATCAATCTCA CGACCTCGGA 
ATATTTCTTG TTTGTCTTTC TCTTCGCCGC ACCAGATTTG GAATGGAAAG TGCTCTACGT 
GGGGAGCGCA CACGATTCGC ATCAGGATCA GGTCCTGGAC GAGATACTGG TGGGTCCGGT 
ACCGGTCGGT CGGAATAAAT TCGTCCTGCA GGCCGACGCA CCCGATAGTC AAACCCTGCC 
CAAAGACGAA CTGCTCGGCG TCACGGTCGT TCTCGTCACC TGCCGGTACA AGGACCGGGA 
GTTCGTACGG GTAGGCTACT ACGTGAACAA CGAATACACC AAACCGGGAT ACGATCCGGA 
CGCGGACGGC CCCGTCTCCT GGCCCTTCGC CTTGGAGCAC GTCACGCGAC ACATTCTAGC 
CGACAAACCG AGGGTCACCA AATTCGCCAT TCCATGGGAC AGCAGTGA 

 

Protein sequence

NTQVVLDNPT CFLNPFQFEI TFECLQELED DLEWKVLYVG SAHDSHQDQV LDEILVGPVP 
VGRNKFVLQA DAPDSQTLPK DELLGVTVVL VTCRYKDREF VRVGYYVNNE YTKPGYDPDA 
DGPVSWPFAL EHVTRHILAD KPRVTKFAIP WDSS