| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48903 |
|---|
| Symbol | |
|---|
| ID | 7194976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011687 |
|---|
| Strand | - |
|---|
| Start bp | 641592 |
|---|
| End bp | 642798 |
|---|
| Gene Length | 1207 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183524 |
|---|
| Protein GI | 219126563 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAGTACTACG CCTTTCAAGC CCATGTCGAC CATTCGCGCT TCTGGTCGTG ATAGAAGCGG
TAGTCCTCGC CAGAAAACCG GCAATGTCGT ACAAAACCGA GTCGAAAGCC CGTTCGTTAC
AACTACCGAC GTTATGAGCG AAATCAATCG CCACTTAGCC GATCTTCACA AGCATAAGAA
CAGCAGCGAC ACCGAATATA CAGGGGATGA GGACAACAAC AATTTGCGTA GCAAAAAAGC
GCCACGCTTT GAACTACAGC GCAAATTTGG TGACGGAACA ACGCGCAGGG CATCACCAGC
CGAACAAGCC GCTAACGATA TGAATTCTAA GCTCCAGCAA GTTGCAGTGC ACGTAGCCAG
TCTCTCTACG ACACGAGAAC AGTATGCATG GGCCGAAGCA CAACGAAGTC TTGGAAATGA
ATTCTATCAT CAACAAGAGT ATGAGCAAGC CATCGACGTC TACTTGACGT GTTTAATTGC
TGTACAACCT CAAGACGAGT CAGACTGCCT GGTCCTAGTC TTGTTTCTAA AGGTCATGAA
CAACCTCGCC CTATCCGCCC TACAACTCGG ATGGTACAAA AAGACCATTG ACTTCTGCAC
CTTAGCCTTG GATCGCGTCA GGAAACAGCA ATCGCTTCAC TCACACCAGC AACACGTGCA
ACTACAAATG ACCAAAATTT ATTACAAACG GGGCAAGGCA CGCCGGCTGC GAGGCGAGTA
CAAGCAATCT CGTGCCGATT TGCGAGCAGC GCAATCGCAA ATATCGGTTG GCGAGTATAT
CATTATCGAT GAATCACAGC AACAACAGAG CTTTCAAGAG GCGATTGACA AGGAATTCCA
GCTGCTGCAC CAGGCAGAGT TCCAAGGCAG GCGCAACCAA GAAAAGCAGC AACGAGCCAT
GCGGCAAATT CTCCTTCATT CGGGGGAGAA ACAGCTTGCT CTGGGCACAG CGACAGATCA
AGCAGCCAAT GAATGTATCG CCTTATACGC GGAAAAAGCA TCCAAACGAA CATTTTCTGC
GTTGCGTGCT CCAGCAACAT CCCTTGTGGA TGACGATAGC ACCTTTGACA TCGATGAAGA
GTCGATGACA CCGACTTTGT GGCAATACTA TCTTACGGTT ATAGGTCGAG TTGCCGAGAC
ATTGCTCTTT TGGATCGGAG ACGAGGAATA TGTGCAAAGT GTCTCGGAGC GGAAGAAAGC
CATGTAG
|
|---|
| Protein sequence | MSTIRASGRD RSGSPRQKTG NVVQNRVESP FVTTTDVMSE INRHLADLHK HKNSSDTEYT
GDEDNNNLRS KKAPRFELQR KFGDGTTRRA SPAEQAANDM NSKLQQVAVH VASLSTTREQ
YAWAEAQRSL GNEFYHQQEY EQAIDVYLTC LIAVQPQDES DCLVLVLFLK VMNNLALSAL
QLGWYKKTID FCTLALDRVR KQQSLHSHQQ HVQLQMTKIY YKRGKARRLR GEYKQSRADL
RAAQSQISVG EYIIIDESQQ QQSFQEAIDK EFQLLHQAEF QGRRNQEKQQ RAMRQILLHS
GEKQLALGTA TDQAANECIA LYAEKASKRT FSALRAPATS LVDDDSTFDI DEESMTPTLW
QYYLTVIGRV AETLLFWIGD EEYVQSVSER KKAM
|
|---|
| |