Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48883 |
Symbol | |
ID | 7194961 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | - |
Start bp | 572848 |
End bp | 574462 |
Gene Length | 1615 bp |
Protein Length | 414 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183511 |
Protein GI | 219126536 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGACTTCCTT TCGGAAAGGC AGGAAGAGGA GTTGTCGAGA AAGCCTGTGT GAGAGAAATA TGAGTCACTG ATACCGTCAC ATCCATACCG ATGATTGTGT CTCCCAAGGC CTGACGTTTC AAGTATGGCA TCGTCGAACA AAAATACGGC AGACAACGGA GGATGCACGT ATCCAGCCGT AGTAATCTGT ATAGACATTG ACCGCAGTGA CGACGACGCG AAACCTGCCG CCTCGGAAAT TGATCCACTC GCCGTCACAA CCGTCGCCAA CAGTAGAGCT GGTCTGAGGA ATCGTTCCGG CCTCAACTTT GCAACACAAG CGAACACCGC AGTAATTAAT CTTTGTAATG ATTTCCTTCT TGATGCGATG GAGGTGAATG CGACCCCTCA AGTTCACCAG AGACACCGTA AACGCGCGGG AGACTCAACG GAGCTAGCGT CCAAAAAGGT GTGTCCAGAT GCCTATGTCA TTGACGGAAT CGACACCAAT ACCAGCAGCT TGCCGAATAC TGGTAGTGAG GAGGACCCTT CCACGCGATA TCGACAAGTA TTGGGCCCGC TACGGATGAA ATTTGTTGAG TCGTTTAGTT CGATGCGGCA CGTGAACGAA TCAGGCGTAC CGATAGGGAA ACTCGATGTA AATGCGCTTT ATAAAGAATT ACTCGAGTTT CAGATCAATC TTCCCGTTGA ATTTTCGAGT GCCATATTCG TGCGATCCGT GGAATCGAGA TTGGATTTGG TGCGAGCCAT GATTACTGGT ACGTTTCTAT GGATGAAACC CTTTGGCCTT GCTATTCGCC CGATTTGCTC GCGCACGTAC CAGGTGTCTC ACGTTGCCGG CAACACATTT CGACAGGGCC GGAGGGTACA CCATACGAGA ACGGATGTTT CTTTTTCGAC ATTTGGATGA ACGACTATCC CCAGTCCCCT CCCAAAGTCA AGTTCTTGAC CACTGGAGGT GGTACTCTGC GTTTCAATCC CAACTTGTAC AGTTGTGGCA AGGTTTGTCT CAGTTTGCTC GGAACGTGGA GCGGGCCTGG CTGGATCCCC ATGAAATCCA CTCTGCTACA GGTATTGGTT AGTATACAAG GTTTGATCTT TGTACCGGAT CCGTACTTCA ACGAACCGGG GTATCATGAT GAAGCTGGCA ATAAATACCA CATCGCCGCA TCAAAAGACT ACTCCAATAA AGTTCGAACG GATACGTTGG AGCATGCCAT GCTGCCGCAT TTGCAACAGC TTCATTCCAA CACCCTGGAC TTTCCAGAAT TCGAATTGGC CCTCACAAAT CATTTTTTAC TTCGCGCTGA CGCCATACGT GTTCAGCTTG CGAAGTTGGC CGACGCAATT TCAGCCTTGG AACCGATGGT GAGGAAGATG GAGACAGCTT TAGAGATTGT TGGAGCTAAG AACAGGCCAA GGGCACACCC GACTGCGGGT CCACACGAAG TTGTTACTGT AGACTAAGTT CAAAATGTGG ACTTTTTTTG TAGTGGGGGT TATGTTAGCC TTACGGGGTC CAGAGGAAAC AAATTGACAG TGGAAAACTC TCTCTCTCGA TTGGTCCGAC TACCTAAATC TGACACTTAA GTTGTACGTA TTTGTTTTGC TCTTT
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Protein sequence | MASSNKNTAD NGGCTYPAVV ICIDIDRSDD DAKPAASEID PLAVTTVANS RAGLRNRSGL NFATQANTAV INLCNDFLLD AMEVNATPQV HQRHRKRAGD STELASKKVC PDAYVIDGID TNTSSLPNTG SEEDPSTRYR QVLGPLRMKF VESFSSMRHV NESGVPIGKL DVNALYKELL EFQINLPVEF SSAIFVRSVE SRLDLVRAMI TGPEGTPYEN GCFFFDIWMN DYPQSPPKVK FLTTGGGTLR FNPNLYSCGK VCLSLLGTWS GPGWIPMKST LLQVLVSIQG LIFVPDPYFN EPGYHDEAGN KYHIAASKDY SNKVRTDTLE HAMLPHLQQL HSNTLDFPEF ELALTNHFLL RADAIRVQLA KLADAISALE PMVRKMETAL EIVGAKNRPR AHPTAGPHEV VTVD
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