| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48882 |
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| Symbol | Lhcf15 |
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| ID | 7195163 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | + |
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| Start bp | 569585 |
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| End bp | 570772 |
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| Gene Length | 1188 bp |
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| Protein Length | 203 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | protein fucoxanthin chlorophyll a/c protein |
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| Protein accession | XP_002183381 |
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| Protein GI | 219126264 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.208787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GACGAGAAAA TGCATGTAAG CTGCTCTAAA TGTTTGTGTG GGAATGGTTG ACTGCAGAAG
CCAAAGAACA AGCAAAACAG GCTAAATTCG ATCGGATTCG GTCCCCATTG AAGCATATCC
TTTCGATGAC GAAGATCCTA GATGAATCGT GCATCATGAG CATGAGCAAG ACAAGCACTG
GTGAAGAGGA TCAACAACTT CTCATAATTT CGAATCGCGA TCGTATCAAA ACAGACAGTC
ATGAAGTTTG CCTTTGCCCT CTCCCTCTTC CTCGCCGGTA CCGAAGGATT CGCCCCCGCG
AAGCCCGGTA CGACGCTCTC CACGGCCCTC CAGTCCTCGT CGAGCTACGA AAACGAGCTC
GGAGCCATTG ATCCTGTTGG TACGTAACAT TCTTCGCAGC CTGCCAAAAT CTCACCACAC
GACGCATCTA TTTCTTTTCG TATTCAAGAC GTCGTGTATT CGTAGACTTC ACCGTTTTCG
CTTGTGTCCT ACAATTTTTT CTAACATCAT CTTCTTTGAT CTTCCTCTGG TACTTCTTTC
GTCACCACAA ACAGGCTTTT TCGACCCCGC GGGCCTCACG AGCAACATTG ACGAAGAGAC
TTTCCGCCGT TATCGTGCCG GCGAAATCAA GAACGGTCGT GTCGCCATGC TGGCTGTCAT
TGGGTACATT GTTCCCGAGT TTTACCGCTT CCCCGGAGAG CTCATGCCTG GACTCGCCTT
TAAAGATATT CCCAACGGCA TCGCCGCCGT CAATGCTATT CCGTCCATCT TTTGGATGAC
GACTTTCTTT GCCATTGGTA TGGTGGACTA CCTCAATTCG GATAACCTCG GCTATCACGA
GATCGCCCCT GGTCCGGAAA TGGATGAGGA AACCATGAAC ACCCGCCGCA CTAACGAGGT
CAGCAACGGC CGCCTCGCCA TGCTGGCCTT CTTTGAGCTC CTTCGCCACG ACTGGCAGAA
CACTGTCCAA CCTGGCTTTG ATGGCTTTGA CAGACTCATC ACCGGCCTTC CCTTTCTTTA
CAACTAACGG GAGTCTCGTT TGCGTCGCTC GCTGCGTTCG ATACCGCAGC TGGCCAGTGA
CCTTTGGGGG GTAGAGACCA CAAATCCTAT TTGGAGATGA GGAACTCCTT CCTGTAGTAA
TGCTGTACGT TAAGCCAAAA TTTGCATTGC TCAACAAGGG CAAGTCTG
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| Protein sequence | MKFAFALSLF LAGTEGFAPA KPGTTLSTAL QSSSSYENEL GAIDPVGFFD PAGLTSNIDE
ETFRRYRAGE IKNGRVAMLA VIGYIVPEFY RFPGELMPGL AFKDIPNGIA AVNAIPSIFW
MTTFFAIGMV DYLNSDNLGY HEIAPGPEMD EETMNTRRTN EVSNGRLAML AFFELLRHDW
QNTVQPGFDG FDRLITGLPF LYN
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