| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48875 |
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| Symbol | LLA1 |
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| ID | 7194955 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | - |
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| Start bp | 544510 |
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| End bp | 547002 |
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| Gene Length | 2493 bp |
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| Protein Length | 579 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | lupus la protein |
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| Protein accession | XP_002183506 |
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| Protein GI | 219126525 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.407327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAAATCAAGA ATAGACACAT CCGCAACGTT GACCTGCACA TCCCGCCAAA CGAGATCGTG
TGGCGTAGAT TGCCGCTCAC TGTCAATCCA ACAACGAGCC ACACAGTCCT TGTTTCTCGG
TCGTACGGCA ATCGAATCTA GGATACATTC ACACGTAGAC GTAGACGTGC ACGTACACGT
AAATCTTCAC GTCTTCTTCG ATACTCTTAC AGGGTGTCGG AAAGATCCGG TTCTTCCATC
TACGAATATA TTCTTGGGAA CACTCCTTTA GTGTCAGTCT TTTTACAGAA AGCCACCTCT
TGTCCTTGTT TCATCAGTCA TTCGCCCAGT AATATCAACA TGACAGAAGC TACCATGTCG
AATCTTTTAG AGGCGGCTCG AGAAACGACT GCACTGGAGT GCATTAGTCG AGAAAATACC
AAAGAAACAC AACTCAACTC TTCCACATCT TCGTCATCGT CGTCCCTGTC ATCCGCGTCC
GAATCGTTGA CTAGGACAAC AATCCCAGCG ATGTTGAATC AAACCAAAAT AAGACAAGGA
TCGACGGAAG GCGAGGTTGA CACGGACCCA ACGGGAACGG CCAGCCATGC TGCTGTACAC
GATGAAACTG CCAGTCGCCT CCTTGCCTTG CAAGCAGACG CAATGGCGAG CGAACGGGAG
CGCATGCTTC TTGAACAAGA AGGCCTGGTT TTGGGGATTC TCGCCAAGCA GCTGGAATAC
TACTTTTCCC AAACGAATCT GGCCAAGGAT ACCTACCTGC AAACCCTCCG GTCCCTCAAC
GACGGATGCG TGCCCGTCAC AATTCTCGCC AATTTTACCA AGGTTCAAGC CTTGCTACCG
GGACGAACGG AACTCGGACG AATTCACGCC ATTCGTCAAG CAGTAGAATG TTTCAGCCCC
AACGCCTTGC GTCTGTTTGT CATCGACTCG GTCAACAGCA AAATTGTTAC GGACCAGGAG
GATTCGGTCG ATGAATTGAC GACAAGTGCT ACGACATTTA TAGTCGCAGT GGGTACCTGG
GATCAACAGC CTTTGCCAGC TGTTTCCGTA GTATCTACTG CGAATGTTGC CTCAGTGAGC
GCATCCCACG CTACGATCAT TGTGCGTGAT GTTCCGGAGC ATGTATCCGA AGAAGATGTC
CGATTAATCT TTGCACTTCC GGATGGCCCG TCCATTGTTT CGGTACGCCA GGACGTTGCT
CATTGCTGGT ACGCATCCTT GTTGAATCCA CCGGTCGCTT GAATATTGTA TCTTTGCAAA
CGGTGCTTAG GCTCACCACT TACTTTCCTC AACTACAGGT TCGTGACCCT GGATATCGAA
TCCCCGGGTG CCGACGGCGA CGATGTTACG ATGAAGGTCA TGATGCACTT ACAGGCCCAA
CTTTTGGGTG GAGAACCCGT CAAGGCTCGA CGAAAGGCGA GTGTAGCCTC CAACCTTTCC
ATCGACCCTA TTCCGTTTTG GTTACCCCCA ATTCCGCTTA AACGAAAGAA GAAAAAGAAG
CGATCCAAAA AGAAGAAAAA GAATTCCAGT ACCTCCGGCA GTGCAAATTC CAACAGCGAC
GGTACACACA ACAATATCAA CGCAGCTGCG GCGACCAGAA ATCAAAACCA GAATATGCCG
GGAAAAGGCA CAGAAACTGC CTCATCATTT CACAGCGCAT TCGCAATCAA GAGTAGCATT
CCGTTGGTCA GCCCGCCAAC CTTGGGGGAA GACAACTTTC CAACGCTTCA AGACAAAAAG
GTTGAATGGG AGACTCCACC GACGGCAGGA CTCGAAGACG ATGAAAAGTA CGACAAGCAC
GAAGACGATG ATGCTGACGA CGAGGAAGAC AAAGAGGACC CTAAATCGGT CAAGGCCTTG
TCGGATGTTG CGTCAACAGC GACGACGACT TCGTCTAGTA CGGAGTCGAC CCCCCACGGC
AAGAAACTCT GGGGGACTGT GGGAGGCTAC GCCGCGGCCC TCATGAAGCA GGCCGTTGTA
CCACCACCAG TTAGTGAGAC AAAAGTTGCT ATTCTTCCTG TCAGTACGGA ATCGAAAGCG
GGGCATTTTT CTGCTCTGTC CCACAAGGCT ACGGCTCCAG CTCCCGTTGT GACTGTTTCT
ACTCCAAAGT GGGGCGGAAT TCGGTCATTT GCCGATGTCT TACGCCAGGA GGAAGCGCAG
CAATCATAAG GACAATGCTT GGGTTGCGTT GTGGCGCACT ATTGGGCGAA CAAGCCTGCT
CTCGACGAGA CGCATTCACT GTGTCGTCTT TAACGAGTGT CTACCCCCAC ACGCCCTTGT
GCATTGGACA AATCACTTTG CTTCTCGTAG GGAGCGGCCA CTTTTGCCGC AGTACGTACG
CAACAACCAC AAAACTCACA GCTTCACATC TTGATTACCA CCTGTTTACA CTTAGCAAAA
CGAAGAGCTA CTATGATGTT GACAAGCCCT TACACTCTAT CATGCAGCAA CCTAATGCGA
CTAATATTAC TAAAATGGAA ACGATACGCT ATT
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| Protein sequence | MTEATMSNLL EAARETTALE CISRENTKET QLNSSTSSSS SSLSSASESL TRTTIPAMLN
QTKIRQGSTE GEVDTDPTGT ASHAAVHDET ASRLLALQAD AMASERERML LEQEGLVLGI
LAKQLEYYFS QTNLAKDTYL QTLRSLNDGC VPVTILANFT KVQALLPGRT ELGRIHAIRQ
AVECFSPNAL RLFVIDSVNS KIVTDQEDSV DELTTSATTF IVAVGTWDQQ PLPAVSVVST
ANVASVSASH ATIIVRDVPE HVSEEDVRLI FALPDGPSIV SVRQDVAHCW FVTLDIESPG
ADGDDVTMKV MMHLQAQLLG GEPVKARRKA SVASNLSIDP IPFWLPPIPL KRKKKKKRSK
KKKKNSSTSG SANSNSDGTH NNINAAAATR NQNQNMPGKG TETASSFHSA FAIKSSIPLV
SPPTLGEDNF PTLQDKKVEW ETPPTAGLED DEKYDKHEDD DADDEEDKED PKSVKALSDV
ASTATTTSSS TESTPHGKKL WGTVGGYAAA LMKQAVVPPP VSETKVAILP VSTESKAGHF
SALSHKATAP APVVTVSTPK WGGIRSFADV LRQEEAQQS
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