Gene PHATRDRAFT_48869 details

Gene Information

• Locus tag: PHATRDRAFT_48869
• ID: 7195155
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: -
• Start bp: 527635
• End bp: 529832
• Gene Length: 2198 bp
• Protein Length: 673 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002183503
• Protein GI: 219126519

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.44091
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGATG ACGACGAAGA AAGCGGGCGG GCGGACATCT CGACATTTCC GCGTTTTGAT 
GACAAGTTAG CACCTCCTCG CCCCTTCCTT GTACCGTCTT TTGATGGTGA AATAGTGGAA 
ATATTGCCGT CCGAAAAGGC GAACCGCAAA ATCAGATTCG ACGAAACAGT CCACATTTGC 
GAGATCGAGA ATCGTTTTGC ATACGGAGAC TACCCTGCAG ATGACGAGGA AGGAAGCTAC 
GAGATCGAAA TTGTGGATGA GAACGACGAC GAAGCTGATT TTTATTTGGA AATTGTTGAC 
GGCGAGGTGT ACTATGTTTT CGAAACCGAG GATGATATTA GCGTTGAGGA TGACAGCTAC 
GAAACAGAGG ATGAAGATGA CGCCGAGTCG AATGACGGTC CAATCCAGTC GCTTCAGCTA 
GCTATTGCTA ATATGCAGAT TCCAGACTTC GATGGAGATG TGTGTGTTAT GGCGGACAAT 
GTCGAAATTG AAAAAGTTGG AGAAGACGAC AATGGATACT CGGAAGACAG TTTAGGAGAG 
AGTCAGCACC CGACTATTGA AGAAATCAAT ATAAAAGATA CAGACGAAGT AATCGAGTTG 
GAAGAAAATA ACGGAGAATA CGAAGAGAAG GTTGCTAGTA AGATCGTTTC TCTCAGTATT 
CACACGAAGG AAGAACCACT GTCTTCGCTG GATAGTTCAA TTCGCATTCC GACTGCAGCA 
ACACCAGATA TTAACCTGAA AACCGACACT TTAGAAGCAA GAGTTCAAGA TGAAGACCTC 
ATGAACAATA CTGACGCAAT TGAAATTTTC ATAGGAAAGA AAGGACCAAT AGCCGCTGCG 
CAGCTAGAGG AAGCTGGGCA GTCAATTTCA GGATCTGATC ATGAAAAAGC AAACGAGAAT 
AACGATACGC CGATTTCACC TCAAGCTGGC GTTGCACCAG GGGCTACCGC ATCACCACTT 
TCCAGTATCA GATGCCCTGT TCTCGCCACT CCCAACCATA CCCCAAAACG CTCTATAGGT 
GCTGATGCTC CCGACTCACC TGTCAAGGGA ATCCCTCCCG CAAGCCCAGT CAAATCCATC 
CTTCGCGCTT GTCCTGAGAG CCCTCGGAAA GCACCGAAGA AGAAGCCCAA GGCAAGAGAG 
GTATCAACAA AGAGGGAAAA AACCTTTACG AAGACATACG TCCGCGCTGA GACGTTCGAC 
GGCGAACACC GTGTTTACAG CTGGGCAAAG CCGGACTGGA CGCAAGAAAC GAAGCTGAAG 
TCGACTGGCC TTGGCGACCG TATTCGCAAC GGTGGCAATT TGGCTAATCC CATTACCTTT 
CCAAAGAAGA AACCAGCAAA TGCTGATCTG GTTGAGGAAG AGTATGAACA AGTCAACAAA 
GAAGAGCTTA TTCGACGCAT CAAAGATGGT CATAGCGCCC CTGGAGTCAA GCTGCCTCGA 
TACCTACGAG GACAGAGCAA ACTGAAAATT AGCGTTCACG GTGCAAGGAT TCGCGACGGA 
GGAGATCTTG TCAAGCCAGT CACCATGGCA ACGACGACTA AAAAATCCTA TGAGTTCCAG 
AAGCCTGAAT GGACTCAAAA GAAGCTGAAT GAAACGGAAA TTGGAAAGAA AGTGAAATCA 
GGGGCTGACA TGCAACAGCC AGTAACAATG GCTACGACAC AGAAAAAGTA CAGTTGGGAA 
AAGCCAAGCT GGACAAAGCA GCGCAGTCTT CGTAGTCTAG GAAGTTCGGA TGGCGAAGAA 
GCGGCGTCGG AAATAGAAAA GAAGATATAC ACTTGGGAGA AGCCAAGGTG GGCAAAAGAA 
AAGGTTCTAG GAACGACGGG GAAAATAAGA AAAATACAGG ATGGCGGCGA TATTGTGAAA 
CCAATTACGT TTCCAGAAGG CAAAGGGGAT GGAATCAACC AAGAAGTTCG GCCAGAACTT 
GTGCTGAGGC CAAGCAAGAA GGGAATACAT GCGAGGCATG GCGAAAAGCT TGAACGGCCC 
ATTACTGTTT TACCTGACCT CGCAAAGTGT AAGCACACAT GAAGAATTGT GCCATTTCGA 
TTTTTTCCTA TCCAAGCTCG TGCGTTTGCC ATTCACTATG TACTCTACCC ATCGACGAGA 
GTTATAAGTT ACATTCATTT GTTTTGTAAG GAGACCAACA GGCCCAATCA GTAGCATAGG 
TTGACAAAGT CCTAATTCTT GCACGGGCGA AAAGCAAG 

 

Protein sequence

MSDDDEESGR ADISTFPRFD DKLAPPRPFL VPSFDGEIVE ILPSEKANRK IRFDETVHIC 
EIENRFAYGD YPADDEEGSY EIEIVDENDD EADFYLEIVD GEVYYVFETE DDISVEDDSY 
ETEDEDDAES NDGPIQSLQL AIANMQIPDF DGDVCVMADN VEIEKVGEDD NGYSEDSLGE 
SQHPTIEEIN IKDTDEVIEL EENNGEYEEK VASKIVSLSI HTKEEPLSSL DSSIRIPTAA 
TPDINLKTDT LEARVQDEDL MNNTDAIEIF IGKKGPIAAA QLEEAGQSIS GSDHEKANEN 
NDTPISPQAG VAPGATASPL SSIRCPVLAT PNHTPKRSIG ADAPDSPVKG IPPASPVKSI 
LRACPESPRK APKKKPKARE VSTKREKTFT KTYVRAETFD GEHRVYSWAK PDWTQETKLK 
STGLGDRIRN GGNLANPITF PKKKPANADL VEEEYEQVNK EELIRRIKDG HSAPGVKLPR 
YLRGQSKLKI SVHGARIRDG GDLVKPVTMA TTTKKSYEFQ KPEWTQKKLN ETEIGKKVKS 
GADMQQPVTM ATTQKKYSWE KPSWTKQRSL RSLGSSDGEE AASEIEKKIY TWEKPRWAKE 
KVLGTTGKIR KIQDGGDIVK PITFPEGKGD GINQEVRPEL VLRPSKKGIH ARHGEKLERP 
ITVLPDLAKC KHT