Gene PHATRDRAFT_48864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48864 
Symbol 
ID7195151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp516403 
End bp517819 
Gene Length1417 bp 
Protein Length395 aa 
Translation table 
GC content51% 
IMG OID 
Productreductase with NAD or NADP as acceptor 
Protein accessionXP_002183371 
Protein GI219126243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.58602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGACCGAGTG CTTTCTTTAT CATCGTTGCT GTTGCTTCCG GTAGCTCACA GTCAATAAGT 
GCAGTGCCGA GCTCGTCATG TTTGGTTGGA AATCTCCCGG CAAGAAAAAG GCGGAGCCTG
GCTTTGCCAC GGCGCAGGGC TGTGTGGCAC TCGTGACGGG TTCCTCAGGC TTGTGCGGTG
CTCGTCTCGT GGAAATGCTG CTGGATCGCG GTGCCCGAAC CGTCATTTGT TTCGATCGGG
CAAAGCCGAG TGAAGCTCTC GAACAGCGCT TCCAAGAAGC CCAGAAAAAG ACGGGAGGCA
AATTGATTGT TCTGGCGGGT CCCGACGGCG ACCTGTGTTC CGACGAGGCC GTACAAGCAG
CATTCGACGC CGAGCCCAAG ATTGATGTGG TCTTTCACAT TGCCGCCTTG GTGGGACCCT
TTCACGAATA CGAAATGTAC AACGAAGTCA ACTACAAGGG CACGCTCCGG ATCCTAGAAA
ACTGCAAACG CTGCAAGGTC CCGAAACTGG TCTATTCGTC GAGTCCCAGT ACGCGATTTA
CGGGAAAAGA CGTTACGGGG CAGACGGAAG ACGAGCTCCC CATGCCCGAT ACCTGGCTTG
CTATGTATGC CGAAACCAAG GCCTACGGTG AAATGGCCGT CAGCAAGGCC TGCAGCGACA
CCCTTCGTAC CATTTCGGTA GCCCCGCACC AAATATATGG CCCGCACGAT ACTCTTTTTC
TTTCCAAACT ATTGGAAACA GCCGGAACAG GCCGTTTGCG TATTTTTGGA CAGGGTAAAA
ACAAAATCAG CGTTTGTTAC GTCGACAATT ACTGCCACGG CCTCATGTGT GGTTCGGACG
TCCTGGACAC GCCCAATCAT GCAGCCCTGG GAAAGTTCTA CATTATTACC GATGGCGAAC
CCCAGCTATT CTGGGCCATG CTGAATCAAG CAGTTCTAGC CATGGGATTT ACCGACCTGT
ACAGCAAATT CCATTTGCCC GTATGGTTTC TTTACATAGC GGCCTACGTC GCCAACGTGA
TTGGATTCGT AATCAAGAAA AAGCTCAAAC TCAACCCGTT CAACGTCAAA ATGTTGACAA
TTCATCGGTA CTTTTCTATT GCCAACGCTC GACGCGATTT ACTGTACGAG CCCGTCTTGC
CGTTTAACAA GGCCTGGCCT CTTACGATTG AATGGTTCAA GGAACACTGG CTGCCGCAGT
GGGAAAAAGA AACGGGAAGA GCAGACTCTA GTGTTGTCGC TGGAAGAGAT ACTAAACAAG
ATTGATCTTG AGTAACGCAA TGCTCGGACT ACATGTTTCA TTTTCAAAGT CGTTTGCCAA
GTTCGTTCAG ACCAGAGCCT CGTATTGAAC GAACGTAGTA GGACTAAATT TCGCTCAAGT
TCAAACGGAA TAATACATAT AAGTATCATC GCCTGTG
 
Protein sequence
MFGWKSPGKK KAEPGFATAQ GCVALVTGSS GLCGARLVEM LLDRGARTVI CFDRAKPSEA 
LEQRFQEAQK KTGGKLIVLA GPDGDLCSDE AVQAAFDAEP KIDVVFHIAA LVGPFHEYEM
YNEVNYKGTL RILENCKRCK VPKLVYSSSP STRFTGKDVT GQTEDELPMP DTWLAMYAET
KAYGEMAVSK ACSDTLRTIS VAPHQIYGPH DTLFLSKLLE TAGTGRLRIF GQGKNKISVC
YVDNYCHGLM CGSDVLDTPN HAALGKFYII TDGEPQLFWA MLNQAVLAMG FTDLYSKFHL
PVWFLYIAAY VANVIGFVIK KKLKLNPFNV KMLTIHRYFS IANARRDLLY EPVLPFNKAW
PLTIEWFKEH WLPQWEKETG RADSSVVAGR DTKQD