| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48855 |
|---|
| Symbol | |
|---|
| ID | 7194941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011687 |
|---|
| Strand | - |
|---|
| Start bp | 486371 |
|---|
| End bp | 489395 |
|---|
| Gene Length | 3025 bp |
|---|
| Protein Length | 903 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183493 |
|---|
| Protein GI | 219126498 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.105124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCGAC TTGTTTGGTC CATAGAAGTC TTGACGACGA CTTTTCTCGC AGGCAACTGC
GTTTGTTTCC TGTTATCAAT AATACCTTCC GTGGCCGCTT TTGCCGAAAC ACTCCGCGTA
CGACGCGTTC TACCATCGGT CTCGCCACAA GACGCGTATG CGCGCTGCTT GCGGGGATGG
AAGCGGGATA ACCTTGGTCT CGTGGGGGTA CCTCCGCCCA TTCTACTAAG AGACGGCCAT
CCTGATACCG GCGTCGGTAT GCTTCTTTTG CGAATACCGC CCTTCGGCTT GAAAGAGGGC
ATCGTCGGCT GCCAGCGGGA CGAGTGTTCT ACCACCATGA ATTACCAAGT TTTGAATCCG
GGATGGTTTA CTTGGCCGGT TGCTGAGCAT GAAGGATGGA TTCGGTTCGC CTCTGATGGG
GAACAGGGAT GTATTTTGGA ATGGACGGTC CAGTGGACAC CGCTACCATT GCCGCTATCC
TTTTGGAACG GTTTTCTCAA AGCACTAACA ACAGTGATAG TGGAAGCCGC GGCAAGCTAT
GTCGCCAGAG GGGGCTCAGG CGCCTACCAA TCAGTTGCTA TCCGCAAAAA AGAGTAGCCA
AAAGATACTG CCCCTATCTG GTACACGTGT AGATGAATGT AATTAATGCA GCAACGCAGT
ATAGATTAAG AAAGATCGTA AACATCGAAG TCATCCGGAA GAGCTGCGAA TTTAACAAGA
ATATCGTGAT GAGATACTCC TGTAGCTCTA GTGCATGGGA CAACAAAAAA TCCTTCGGTT
TGAACAGATC AGTCCGCGTA CCTACGATGA TGTTCTCGTG TGCTACGGGA GGAGCTTTCG
GCGCGGCATT CCCCTTGGCG GAGGTTGATT CTTCTTGCAC ACGCCGAGCA GGTCGAGCCT
GCACAGGGAC GCTTCCGGGA TTCTGTCTCG TTTGGGCGGA TCCTTCGCCA CCCGGCGTCC
GGAGACTGAT GGGTCGCACT GGCGGCCTGG AAAACTCAGG CTCCATCACT TTGGGGGCGA
TCGAGAAAAT TGATCCTATT GTCTGCAAAG GATGCAAATA ATGTTACATG GTCCTCGAAG
AGCTCACAGT CAGGCATTCG CCAACTAACG TTGGATCTGT TCTGCGTTTT CCAGTGCGAT
AGTATCTTCG GCTCTCGATT ACAGAACTCC GGGTTGTATT GTCACATCAT ACTCACAGTC
GATGGGTAAA GGGGTCTGTC CGGCTGCCCC CGATCACGGA TGTACGGGAC ATCTTGTCCA
GGGACCGTCA AACGAATTTG GGGCACGCTT CCGACATGCA TCACACGACT TCGCGATTGC
AATGATCTGT GCACCCTCCG TTGGTTCATT TCACAGCTCG AGCTCGGAAA TACTGAGGTC
ACTCGAACAA GACAAGATGA GGGAATCTAG TCGAAAACGA CCACTTAGAG CAGAAGATGG
CCTACAATCA TCGTCGTCGG CGTCTGACTT GGACCAACAG CAACAACATC ACCAAGACGA
CGTGGATACC CTGGGCGACG CGACGATTGC TTGGTACGGT TCAAACGAGG CGACGGTAGT
ACTAGGGGCA ACACCTCTGT GCCTTTTAGG ACGTGGAAGA ATACGTCTTA TCTCGGGAAC
TGTCAGCTTG CACGGCTTTT GCCTTACCGA TGAATTTCGA GATTTCGAAA GTCCTATTTA
TGCGAGCTGG CTTACTATTG TCGCCGAAGA GCACGGTAAG AAGGGAGGAG AGGTAGCCAA
GGTAGCAGTG GAATCAACAC GGCGTGTTGC TGGTGTTCTC GTACCAACTT TTGAAATTAA
GCTGGCGACC GAGCCCCATT CACGACCGAC CGTTATTCCC CGTCGATGGA CAGAGTCACT
AGACTCAATT CTACAGGAAC AATTGTGTCG ACAACTGGAA AACGAGAAGG CAAGCCAGCG
GAAAAGACCC ACCGCCTTCA CACGTTTACT CGAAAAGGAG AGCAGTAGTG AGAAACTTGC
TGCCAAGGAA ATGGAACAGT CAGCTCCTGG GTTCAAAGTC GTCGTGGTGG GTGCCAAGAA
CGTCGGCAAG TCCACCTGTT TACGCTACGC CATCAATCGA CATCTGTCGA TGTGCAGCGA
AGTAGCGGTA TTGGACGGAG ACTTGGGACA GCCGGAACTA TCGCCTCCAG GGATGGTGAC
TTTAACACGT TTGCGACAGC CAATCTTTAG CCAGCCGCAT TTACACCTAG TAACGAACGA
AGATAATGCG TCAGCTGCAG CGCCTCGACA CGAAATGGCG TATTGGTTTG GGGCATCTAC
TTCACAAGGG GATCCCGAAA AATACGTGAG CAGTCTCACA AAGCTAGTGC GCTACTATCA
CGAAAAGCTT CTTCCTCAAA AGCCTACGTT GCCTTTGCTG ATCAATCTCG ATGGGTGGGT
CAAAGGACTT GGGATGCAGA TCTTGGAAGC TATCCTGCTA CAAATTCAAC CAACGCACGT
GATTCAGATA CTAGGAGATC TCAATTCCAA AGTCTTCGAA TTGTCGTTAC CTGACGAAAT
TCATCTCCAT ATATGTCACG CCTACCACGT GATACCACCA GAGGAACAAC AAAGAAAAAC
AAAAATGTCT ACGCCCACTT CCGATTCCGA GTCGAAGGAA ACATGTGCGC TGGTCGACAG
GCAACACGAC ACTGGTCGCG TTACTTCTCT GTCCGACATT GCGAGTCTCC CAACAATCCC
CTCGTCCATA CCGGCATCAG CGCTCCGGAC ACTCCGCTTT GTCTCCTACT TTTTGGACGA
TGTTTCCATT TGGGATCGCA TACGCTTCGG TCAAAAGGAA CTGATCGTGG ATATTAATTG
TGTGATTGCC AAACGTTTTG CCTCGCAGAA GCCGTACATA GTACCGTTTG AAGCAATTGC
GGTGGATTTT AGTTCCGACG AGTTTCGACG TGACATATGG ACACCAGAAC GGATTCTGGA
CAGTTTGAAT GGATCCATAG TAGGCTTATG CTGTCGAACG GGCAAATCAG ACGACGAGTT
TGACTGTTGT GTTGGTCTCG GTATT
|
|---|
| Protein sequence | MVRLVWSIEV LTTTFLAGNC VCFLLSIIPS VAAFAETLRV RRVLPSVSPQ DAYARCLRGW
KRDNLGLVGV PPPILLRDGH PDTGVGMLLL RIPPFGLKEG IVGCQRDECS TTMNYQVLNP
GWFTWPVAEH EGWIRFASDG EQGCILEWTV QWTPLPLPLS FWNGFLKALT TVIVEAAASY
VARGGSGAYQ SVAIRKKDAW DNKKSFGLNR SVRVPTMMFS CATGGAFGAA FPLAEVDSSC
TRRAGRACTG TLPGFCLVWA DPSPPGVRRL MGRTGGLENS GSITLGAIEK IDPISMGKGV
CPAAPDHGCT GHLVQGPSNE FGARFRHASH DFAIAMICAP SVGSFHSSSS EILRSLEQDK
MRESSRKRPL RAEDGLQSSS SASDLDQQQQ HHQDDVDTLG DATIAWYGSN EATVVLGATP
LCLLGRGRIR LISGTVSLHG FCLTDEFRDF ESPIYASWLT IVAEEHGKKG GEVAKVAVES
TRRVAGVLVP TFEIKLATEP HSRPTVIPRR WTESLDSILQ EQLCRQLENE KASQRKRPTA
FTRLLEKESS SEKLAAKEME QSAPGFKVVV VGAKNVGKST CLRYAINRHL SMCSEVAVLD
GDLGQPELSP PGMVTLTRLR QPIFSQPHLH LVTNEDNASA AAPRHEMAYW FGASTSQGDP
EKYVSSLTKL VRYYHEKLLP QKPTLPLLIN LDGWVKGLGM QILEAILLQI QPTHVIQILG
DLNSKVFELS LPDEIHLHIC HAYHVIPPEE QQRKTKMSTP TSDSESKETC ALVDRQHDTG
RVTSLSDIAS LPTIPSSIPA SALRTLRFVS YFLDDVSIWD RIRFGQKELI VDINCVIAKR
FASQKPYIVP FEAIAVDFSS DEFRRDIWTP ERILDSLNGS IVGLCCRTGK SDDEFDCCVG
LGI
|
|---|
| |