Gene PHATRDRAFT_48846 details

Gene Information

• Locus tag: PHATRDRAFT_48846
• ID: 7195089
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: +
• Start bp: 443322
• End bp: 445360
• Gene Length: 2039 bp
• Protein Length: 627 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002183358
• Protein GI: 219126216

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.422234
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGAAGGCAAC ATCTATTTCC ACATTTGCAT TTCTTACCGT TCCATTGCCT TTTGTAGGTG 
CCGTACCGAA AGTCGTATAA AGTCGACCTC AATGTCGGGA GTCTTTTTAA GTAATGTGGA 
CGACTACTTG GCACCGTCGC AAGCCTGTGT GAATCCTCTC TTTAGCACCG ACAAAAAGAA 
AGACGACGAG AAGAAAAGTG GAGTTGTGGG AACCCTCTCC AATGGTAACC ATGCCAACGA 
CGACCCGAAC AGCTTCGACA CCGCTGCTGC CTCGGAGAAC CCAGCGATTG TCCCAAGGAA 
ACGGGTGCGT CGTCGTCTTC CTGCAGCAAT CACCGCTTCT TCCGACTGGA CACCCAGAGT 
CCCGAAGGAT CCGGTGCAGG CGTCCATTGC TGACTGCTTG GCCTGCTCCG GTTGCGTCAC 
GACGGCTGAG ACGGTCTTGC TGGAAACGCA ACACAGTGTC GTAGCTTTGA AAGAGCTGAT 
TGCGAAAAAA GAAAACGATC GTCCCAAAAT CGTGGCGACC ATTTCTCCCG CCGCTTGGGC 
CGATTTGCAT CGTCATCTCA GTCGTGAATT CAACTGCTCC CCTAGCCTGT CGCTATCGGC 
GCAGCAACGA TGGACTATTC TATTATGGAG AGCGCTGAAG ATTTCGAGCG TCTTGGACGG 
CAACATACCT TTGGCTTGGT CATTGGAGGA AGCGGCGTTG GAATTCTGTC GCGCTTATAA 
ACGAAAGCAA ACCACGAACG ATCCGGACGC CATGGCAGTT GACGTTCCCC AAGACGAGCT 
TTGGCAGCAG CAGCTTATTC CTTCTTTTGC AGAATCACGA TCGCAGTCGC AGTACTACGT 
CAATGGGGAA ACAAAAACGG TTTATCATGA TGGCGGTGCT CAGCAAGCAG GCAGCTTGCC 
CTTATTGTCG GGGTCTTGTC CAGCCGTGGT CTGCCTGGTC GAAAAGTCAA CGCACAAGGC 
AGTGCCTCAT TTGGCAACGA CCAAATCACC ATTGGCTTTG GCCGGTGAGT TTTGGAAACG 
GCAACATTTT GACAAGCACA CCTCCCTTCC ACGACAAGAG TACTATCATG TGGCTATCAT 
GCCATGCCAC GACAAGAAGC TAGAGGCTTC ACGAAAAGAC TTTGAGGATG AAAGCGGCAA 
GGATGTGGAT ATTGTAATCA CGACGCAGGA ATGTATGAGG CTAATTCAGG AACTGCTGGA 
TGTATCAATC GACGATATAG TGAAATGCTT CCGTGAATTA CCTCTGGCAA CATTATCGGA 
TTGTACGTCG TTCACGAAAG CTGCGGAGCC CGTATTGATA GCAGATTCCA ACAGTCACTG 
TATCACGACG CTAACCACAG AAGATGCAGA AATCTCTTCA AATGCTGCCT TCACGTTGGG 
TTCCGGTGGC TATGCGTCCT TCATATTTGC TTATGCTGCC AAGCGTCTGT TCGGAGTGCA 
GCTGGATGCC CACGAATTGC CCTGGGAACC AGTCGGTCCC GACCAGGCAG GGAGAGTCAG 
TGCCCGAGTT GCCGCCTCGA CTCAGCGACG GCGTGATTAC TATCACGTGG CACTATATAG 
AAGCCAAGAC GGAAATTTCA CAACCAATGC CAACCTGAGT AGCGATAGTA AGCCTATCTT 
ACACTTTGCG ATTGCGTACG GGATGCAAAC GCTTCAGCGT GTTCTTAAGC CATACACTTC 
GGAACACTTG CAATCAGGGA TCGGATACGA CTACGTGGAA GCTATGGCGT GTCCTAGCGG 
TTGCGTCAAT GGTGGCGGCC AGATTCGGAC ATCGGCACGG GAGACTCCCA CAGAAACTCG 
GTTTCGCGTT GGTACTACAC AAACACTGCT GCGGGTCCCG CAAATGAACG AGTCGAGCGG 
TCGCACGCAG TTGGGGGCAG GAAGCTCGCT GCATACGCGC TATCACATTG TACCGCCCTT 
GCAACATAGC CTCGGAGCGG CAGCGGGGGT TCCCGTCAAG GATACACAGT GGTAGGCCGC 
TCTGCAAATA GAGAGCTTTA TGTGGAATAA GTCAACTTAA CGAGGTCTCT TCGCGTTAG 

 

Protein sequence

MSGVFLSNVD DYLAPSQACV NPLFSTDKKK DDEKKSGVVG TLSNGNHAND DPNSFDTAAA 
SENPAIVPRK RVRRRLPAAI TASSDWTPRV PKDPVQASIA DCLACSGCVT TAETVLLETQ 
HSVVALKELI AKKENDRPKI VATISPAAWA DLHRHLSREF NCSPSLSLSA QQRWTILLWR 
ALKISSVLDG NIPLAWSLEE AALEFCRAYK RKQTTNDPDA MAVDVPQDEL WQQQLIPSFA 
ESRSQSQYYV NGETKTVYHD GGAQQAGSLP LLSGSCPAVV CLVEKSTHKA VPHLATTKSP 
LALAGEFWKR QHFDKHTSLP RQEYYHVAIM PCHDKKLEAS RKDFEDESGK DVDIVITTQE 
CMRLIQELLD VSIDDIVKCF RELPLATLSD CTSFTKAAEP VLIADSNSHC ITTLTTEDAE 
ISSNAAFTLG SGGYASFIFA YAAKRLFGVQ LDAHELPWEP VGPDQAGRVS ARVAASTQRR 
RDYYHVALYR SQDGNFTTNA NLSSDSKPIL HFAIAYGMQT LQRVLKPYTS EHLQSGIGYD 
YVEAMACPSG CVNGGGQIRT SARETPTETR FRVGTTQTLL RVPQMNESSG RTQLGAGSSL 
HTRYHIVPPL QHSLGAAAGV PVKDTQW