Gene PHATRDRAFT_48815 details

Gene Information

• Locus tag: PHATRDRAFT_48815
• ID: 7195074
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: -
• Start bp: 329899
• End bp: 332109
• Gene Length: 2211 bp
• Protein Length: 519 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002183467
• Protein GI: 219126444

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATGACGCGC GCGGATACCA AGGACCAAAA GTGACTCTGC TTTCCGTGTA CACATATAGA 
AACTCACACC CAAACCAAAT ACATAGATGG ATAACTAGAG GTTGTCGACG GTGTTCTTTT 
TTTTTGACCG TCTAGAGGGA ACAAGAAAAA AGTTGCCTGC GGAGTTTCTA GGTCCGAGAA 
AGGGTGGCAC GAACATCGTT TGCGCGCGCA CTCGAGAGAG GGTGGTGACG CTACGAGACG 
CGAACGTTTT TTACAATATG GCATACATAC CAGACAAGTT CGAACGCTTT GAAGCTTGGC 
TTCGAGAGAA TGGAGCCCAC TTCGAAGCGG TAAGTCAATC GGAAGCCTTT AGCTTGAGTA 
ACGGACGAGC TGTGTGCTGG TCGGCAGTGA GTGAGCGAAA TCCTTAACTG TCTCTGTTCT 
CTCTTTCTTG TATAATAGCT CGAACTCCGT GAGTATGATT GCTTGAATAG CAGCAACACG 
AGTGCTTCCG AAGTCGATGA CGAAGAAAAG AAGGAATCGC CTCTTACGGT GTCCCTGGAA 
GAAGTTTCCG AAATGCGGGG CGTTCATGCG CGACGAAGCA TTCCTCCACA CACCACGTGT 
GTTAGTATTC CTCGTCGCTG CTTGATTACG GTTGAAATGG GGCAGGCCAC ACCGATTGGC 
CGAGCTATTC TTCAGGCCGA TTTAGATCTA GACGCTCCCA AACACATCTT CCTCATGATA 
TATCTTCTCT GGGATCGCAA GACACACGGG TCCTCGTCCT TCTTCCACCC CTACTACGAA 
ATCTTACCAC CTACGCTTCG GAACATGCCT ATCTTCTGGT CCGCATTCGA ATTACAGGAA 
CTTGAGGGTT CGCATCTTTT ATCACAGATT GCCGATCGGG GTCAGGCCAT CCAGGATGAT 
TACGAAGCTA TTCTGGAAGT GGCGCCGTCC TTGGGAACCT TATGTACACT CGACGAATTC 
AAATGGGCCC GCATGTGCGT TTGCAGTCGC AACTTTGGTC TCCAAATTGA TGGACACCGG 
ACTTCAGCCC TCGTACCGCA TGCAGACATG CTCAATCATT ACCGACCAAG GGAAACGAAA 
TGGACCTTTG ACGAAGTCAC GCAGTGCTTC ACCATTACCT CGCTTCAATC GATACAAGCC 
GGTGCGCAGG TCTACGATTC GTACGGACAA AAGTGCAACC ATCGTTTTTT ATTAAACTAC 
GGATTCGCCG TTGAAGACAA CCGGGAATTG GACGGCTTTT GCCCCAATGA AGTGCCGCTG 
GAATTGTACG TGGATCCCGC CGACATACTT TTTCAGGATA AACTGGAGTT CTGGACGCGA 
GGGGAAACGA ATCAAATATC GGGAGCGGTC ACCGCCGGTT TGATTGCCCA AGCCGTTGGT 
GGGAGCATGG GTAGAGGCGT ACCGTCCCAT GCTGCGGAAT CGTACACTTC CGGGCCCGTG 
GTCAAACGCG TCAGGGTATG TGTATCGAAC AACGAGAATA CTCGCTTGCT ATTTTCGTTG 
CTTCGGGCTT TAGCGTGCAA CGAAACAGAG CTATCCGCCA TCGCTTCGCC CGTTTCCAAT 
GATGGGGTAA CACGTGCACT GTTCGGTCTG GGGGCTCCGC AACCGCTGTC GGGTTCCCGG 
AATCACCCTT TTGCACCTTC GTTGAGCTAC CATCGCTCCT GTCGGGATAT TCGGCATCCT 
ATTTCGTTGC GTAACGAACG GGCGAGTATG AAGCTGCTGT TGTCTCTCTT GCACCGGCAG 
CTCGCCTCGT ACCCCACTAC AATCTCTCAA GACATGGCCG ATTTACAGGA TGAAGCGAGC 
TATCCGCAAT TCTCGAACCG TCGTCACGCC AAAATACAAG TGCGTGGTGA AAAGGAAGTT 
CTGCACCATT TTCGCGTATG GTCGGAGACG GCTCTAGATA TGCTGACCTT CATTGAGGAC 
GAGCTCAAGG AACAACAGCA GGGTAATGTT GAAGTTGAGC TGTTGCAAAA CAATCGTACC 
TCGGTAACGA CCACGGGCCA AGGTGTCGTG AATTTCGACG ATGTCATTCG GGATATGGAA 
CAGGACGATG ATGTACACCA TACAATATTG CGTTACTGTG CCGATGTGCT GGGATCATTG 
CGACGCGAGG AATTCAAGCA CTTGCGGTAC GCACAGGAGC ATGCATCCGG AACGAGAGGC 
GGAGCGAGAT CGTCCTTCAG ATCAAACAAT GGCTTGAGCG GTTTTTTTTA A 

 

Protein sequence

MAYIPDKFER FEAWLRENGA HFEALELREY DCLNSSNTSA SEVDDEEKKE SPLTVSLEEV 
SEMRGVHARR SIPPHTTCVS IPRRCLITVE MGQATPIGRA ILQADLDLDA PKHIFLMIYL 
LWDRKTHGSS SFFHPYYEIL PPTLRNMPIF WSAFELQELE GSHLLSQIAD RGQAIQDDYE 
AILEVAPSLG TLCTLDEFKW ARMCVCSRNF GLQIDGHRTS ALVPHADMLN HYRPRETKWT 
FDEVTQCFTI TSLQSIQAGA QVYDSYGQKC NHRFLLNYGF AVEDNRELDG FCPNEVPLEL 
YVDPADILFQ DKLEFWTRGE TNQISGAVTA GLIAQAVGGS MGRGVPSHAA ESYTSGPVVK 
RVRLASYPTT ISQDMADLQD EASYPQFSNR RHAKIQVRGE KEVLHHFRVW SETALDMLTF 
IEDELKEQQQ GNVEVELLQN NRTSVTTTGQ GVVNFDDVIR DMEQDDDVHH TILRYCADVL 
GSLRREEFKH LRYAQEHASG TRGGARSSFR SNNGLSGFF