Gene PHATRDRAFT_48810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48810 
Symbol 
ID7195072 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp311692 
End bp312530 
Gene Length839 bp 
Protein Length220 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183463 
Protein GI219126435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0183416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGCTC TAAAGAAAAA GCGCGAAGAA GCCAAGGCGG CCGCAGAAGC GGCGGCCAAG 
GACGCGGACG CCGACACACC AATTGTCGAT TCTGGCGTCG GTACCCACAG CCCCGACAAC
AACAAGGTGT CCCTACTCGG CGTCGGTGGA AAGAAGCAGA CGAAGAATGG TGAATGCAAA
GCCACCAAGA AACGATCGCC GGGTGAAATT CGGATTCAAA AAGGTACGAG AGAGCAACAG
GACCAGGTCG TGTTCATTCA ACTGTGGATC TTTTGGGGAT TGATATGAAA TGACAATGTT
CTGACCCCAC GCAATGCTCG CGTTTATAGA CATCGCCGAG CTGGATGGTG GAAATGTAGC
CACTATTGAC TTTCCGAATG CCAACGACTT GACATCCTTT CATGTCGCTA TTTCTCCAGA
CTCGGGCTAC TGGAAAGGGG CGACCTACCA CTTTACCTTC ACTATTCCTC CTCACTATCC
ACATTCTCCA CCCAAAGTCG AATGTCAAAC CAAAATATAC CATCCCAACA TTGATTTGCA
GGGAAAAGTT TGTCTCAATA TTCTGCGCGA AGACTGGAAG CCCGTGTTGG ACATTAACGG
TGTCGTGTAC GGATTGATTT ACCTTTTTTA CGAACCCAAC CCGGATGATC CACTCAACCA
CGAAGCTGCG GAACTCTTTC GCAAAGACGT CCGACAATTT GAGCGACTCG TTTCCCGGAC
TTTACGCGGT GGTATTCTGG ATGGAGTTCA GTTTGAGCGG TTGGTGTAGA ACAGACGAAA
CGCTTGCCAG CCAACGAGGC CGGCGCGAGC AGCAGTAAAC TAGAAGCATC CGAAAGAAT
 
Protein sequence
MLALKKKREE AKAAAEAAAK DADADTPIVD SGVGTHSPDN NKVSLLGVGG KKQTKNGECK 
ATKKRSPGEI RIQKDIAELD GGNVATIDFP NANDLTSFHV AISPDSGYWK GATYHFTFTI
PPHYPHSPPK VECQTKIYHP NIDLQGKVCL NILREDWKPV LDINGVVYGL IYLFYEPNPD
DPLNHEAAEL FRKDVRQFER LVSRTLRGGI LDGVQFERLV