Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48810 |
Symbol | |
ID | 7195072 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | - |
Start bp | 311692 |
End bp | 312530 |
Gene Length | 839 bp |
Protein Length | 220 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183463 |
Protein GI | 219126435 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0183416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGCTC TAAAGAAAAA GCGCGAAGAA GCCAAGGCGG CCGCAGAAGC GGCGGCCAAG GACGCGGACG CCGACACACC AATTGTCGAT TCTGGCGTCG GTACCCACAG CCCCGACAAC AACAAGGTGT CCCTACTCGG CGTCGGTGGA AAGAAGCAGA CGAAGAATGG TGAATGCAAA GCCACCAAGA AACGATCGCC GGGTGAAATT CGGATTCAAA AAGGTACGAG AGAGCAACAG GACCAGGTCG TGTTCATTCA ACTGTGGATC TTTTGGGGAT TGATATGAAA TGACAATGTT CTGACCCCAC GCAATGCTCG CGTTTATAGA CATCGCCGAG CTGGATGGTG GAAATGTAGC CACTATTGAC TTTCCGAATG CCAACGACTT GACATCCTTT CATGTCGCTA TTTCTCCAGA CTCGGGCTAC TGGAAAGGGG CGACCTACCA CTTTACCTTC ACTATTCCTC CTCACTATCC ACATTCTCCA CCCAAAGTCG AATGTCAAAC CAAAATATAC CATCCCAACA TTGATTTGCA GGGAAAAGTT TGTCTCAATA TTCTGCGCGA AGACTGGAAG CCCGTGTTGG ACATTAACGG TGTCGTGTAC GGATTGATTT ACCTTTTTTA CGAACCCAAC CCGGATGATC CACTCAACCA CGAAGCTGCG GAACTCTTTC GCAAAGACGT CCGACAATTT GAGCGACTCG TTTCCCGGAC TTTACGCGGT GGTATTCTGG ATGGAGTTCA GTTTGAGCGG TTGGTGTAGA ACAGACGAAA CGCTTGCCAG CCAACGAGGC CGGCGCGAGC AGCAGTAAAC TAGAAGCATC CGAAAGAAT
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Protein sequence | MLALKKKREE AKAAAEAAAK DADADTPIVD SGVGTHSPDN NKVSLLGVGG KKQTKNGECK ATKKRSPGEI RIQKDIAELD GGNVATIDFP NANDLTSFHV AISPDSGYWK GATYHFTFTI PPHYPHSPPK VECQTKIYHP NIDLQGKVCL NILREDWKPV LDINGVVYGL IYLFYEPNPD DPLNHEAAEL FRKDVRQFER LVSRTLRGGI LDGVQFERLV
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