| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48806 |
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| Symbol | |
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| ID | 7195112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | - |
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| Start bp | 286524 |
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| End bp | 288834 |
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| Gene Length | 2311 bp |
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| Protein Length | 675 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183460 |
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| Protein GI | 219126429 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0022357 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTGTTTGCC TTAAAGTTTT CTGCCGGAAC CTGCCTAAAT ATCCGACACG CCTCCTACTT
CTTAGAGTAT AGCAATCAGA GGTCCTCAAA AATTTAGATC CACAACCAAA AATGGCAAAG
GATACCATCG AGCCTGGACC CAGTCCGTTG TTGATTGCGT TTTCGGATCA CCATGTCTCC
GCTTCAGTGA CAGAGCTTGA CCACTACCGT ATTCGTGGAG GAATGGCTGT TGAAACGGAT
TACATTGTGA CCATCACACC CTTGGGAGAA GAGTCCTGCT TTGACAGCTT TACGATCAGC
AAAACCTACT CGGCCTTCCG AACCTTATCT CACGCGCTCA AAAAAATTGT AGATAAGCAC
ACGAGCGCCA ACGAAATTCT CCCACAGAAT GTGATCAAGA CGGCCAAGTA CTGCGAACTC
GTCAAGCATC TCATTGGCTC GCAACGAACA GAGTATTTGG GTAAGGTCAA CTACATGTAC
GTCAAGATTC AAGCCAAGCA GCGATCAAAA CTTCTGGATG ATGTGTTAGA AGCTACGTGT
AATTACTTCC CTGCGGATCC CAGTGTACAT CCGCTCGTGT CCGAAGTCGC CACTTTGCTG
GAAACCTTCT TTTTGACGGA TCACTGTGAA GCAGACGAAA CTGCTGATCT TCATCGAGGC
GCGAGCACGA GTTCTGTAGG AAGTAAAAAT GCCGAAAAAG GTAAGAAAAA CAACCCACTC
GGTTTCCTGC CGACCCTACC GCCGTTCTTG GGCAAGACCA AGAAGAAGTC GGCAAGAAAC
AACATGGCCA GTATGGTGGT TCCAATTACG CGAAAAGTCC GGCGTCCTAA GGCGACCCGC
GACCAGGACG AGGAGGAGCT AGCCTTGGTG GGGGACGATG CCAAACTTTT GTTAGACGAT
GATCGACCCA CGACGGAACT TTTGCCAAAT TACGCACGCC CGGTACCCGT CGTACGCACC
GGTGGTACCC GTATTGGTAA CCTTATCGAG AACAATCCAG TGGTATTCTT GGGCATTGCT
GGAGGCGCCA TTACAGTATT GCACTTTGCG TCCGAAGCAA AGATTACTAT GGACGTTGAC
ATTGCTCTTC TGGTTATCTT TGCTGCATTT TGCCTTGGTT TACATACGCC CCGTCCAATG
GTAGGGGGTT TTGACCGTCC CCCTACCATG AAGGGTACTT TTCAGGCCGA TGGCCATCGC
AAGCTCATGC GGCGTTCGAT GATTGTTGCT GTACCTGTGC CTGGTGAAGT TCGAGAGGAA
GCGGAAGAGC CAGATATCAT TCTTGGAAGT CCTTTGCCTG TTTTTCCGTT GGGTGCCAAA
ATTGGATCGC ACAACAATTG TTGGTCAGAG CCGGATCCAG CGACTTTCCA AGTACGTGGT
GACAAGTATC TCCAAGACAA GAAGAAGATG GCATCTGGGG AGTTTATGTT TCCGGTGCGC
GGTGTGGATT TATTTCTGAC AGACACGTGT CCCGAAAATG TTGGGAGTAA TTCGAGTGTC
TTTGGTGGAC GCTTACGCGA AAAACCTACT TTTCTCATCA ACTTTCGGTT GCCGTGGGGT
GTGCTGATTT TCTATTTCGA AATTCCGGAA AAGTTTGTTC CATTCTTGCA GGCTTGTTAT
GAAGACGATT TCGACAAGTC GACTCTCGCT GAGCTAGGAC CTATGTCTGC AGCGGACAGA
ACTGTGTGTC GCTTTTTAAT GAAAAACATG GCTCACAAGA ACAAAACATT AAAAATTGTT
CCAGTTGTTG TAGCAGGGCC TTGGGTGGTC AAGAGTGTTG TTGGTGGGAA ACCGGCAATT
GTTGGTAACA AGTTACCCAT TAATTACCTC TACGCGCCTG CCAAAGACGA CAAGGCTTGT
TACTTGGAAG CTGACCTGGA TATTGTTGCG TCATCCGCCG CCCGAGGTAT TCTCTCTGTA
GCTCGAACGT ATACGCAAGA CTTGACAATT GATCTCGGCT TCGTCATTCA GGGAAACACC
GAAGACGAGC TTCCGGAACA GATGCTGGTG GGCTGCCGAT TGCATGGCGT CGATCCTTTG
AACGCGGCCT CGATGCCGCC TATGAAAGAC GATCTCATGA TCAACAGTAG CTTGTCGGCG
GATGATGACA GTGTAACGCC CACGTTGCAA GCGGAATGAG CTCTGAACCA AAAGCTCATT
AGGGGAGAAA AATTTATATT CACAAATTCC ATAAAGACAA GGTTCGCTAA CCTTATAGCA
AAAGGAACTA GAGGATTCGC TGTCGCTTAC CTCATGAGTG AATAGGTAGG TATTTTGTGT
CCACCAGTTG TAAAAGTGCG ATTACCCAAA G
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| Protein sequence | MAKDTIEPGP SPLLIAFSDH HVSASVTELD HYRIRGGMAV ETDYIVTITP LGEESCFDSF
TISKTYSAFR TLSHALKKIV DKHTSANEIL PQNVIKTAKY CELVKHLIGS QRTEYLGKVN
YMYVKIQAKQ RSKLLDDVLE ATCNYFPADP SVHPLVSEVA TLLETFFLTD HCEADETADL
HRGASTSSVG SKNAEKGKKN NPLGFLPTLP PFLGKTKKKS ARNNMASMVV PITRKVRRPK
ATRDQDEEEL ALVGDDAKLL LDDDRPTTEL LPNYARPVPV VRTGGTRIGN LIENNPVVFL
GIAGGAITVL HFASEAKITM DVDIALLVIF AAFCLGLHTP RPMVGGFDRP PTMKGTFQAD
GHRKLMRRSM IVAVPVPGEV REEAEEPDII LGSPLPVFPL GAKIGSHNNC WSEPDPATFQ
VRGDKYLQDK KKMASGEFMF PVRGVDLFLT DTCPENVGSN SSVFGGRLRE KPTFLINFRL
PWGVLIFYFE IPEKFVPFLQ ACYEDDFDKS TLAELGPMSA ADRTVCRFLM KNMAHKNKTL
KIVPVVVAGP WVVKSVVGGK PAIVGNKLPI NYLYAPAKDD KACYLEADLD IVASSAARGI
LSVARTYTQD LTIDLGFVIQ GNTEDELPEQ MLVGCRLHGV DPLNAASMPP MKDDLMINSS
LSADDDSVTP TLQAE
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