Gene PHATRDRAFT_48801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48801 
Symbol 
ID7195065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp271999 
End bp272429 
Gene Length431 bp 
Protein Length118 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183455 
Protein GI219126419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGTGAACAGC CGTTCCATCT TCACTACTGT TAATCGGATC ACGATTATGT CCGACTACAA 
TACCCGAGCT GCTCAGTATA GCTTCAGTAC GCCAGAGCAG GTTCAAGCCG CTCTCGCGGA
TGAAAGCACG TACGTGTTGG ATGTTCGTAA CGCAACCGAG ATTGCTGCGG ACGGAAAAAT
TGACCACGTT CGATACATCC AGAGTGCGTG CACTCCGGAT GCAGCTCCCG AACTAGAAGG
AAACGCCTCA AAATTGCTTC CCGAGAAGAT CGCGACGGTT GTTGTTTACT GCAAGTCTGG
ACGCAGAGCA TACAAGGCTA TGCAGGTTTT GGAAAGCCAA GGATATATCA ACGTTTTGAA
TGCAGGTGGA TATACTGACA TAGTCAGTAA TAAAGATCGC TAGGACTAAT CTCTAGCTGT
ATATTATTCT T
 
Protein sequence
MSDYNTRAAQ YSFSTPEQVQ AALADESTYV LDVRNATEIA ADGKIDHVRY IQSACTPDAA 
PELEGNASKL LPEKIATVVV YCKSGRRAYK AMQVLESQGY INVLNAGGYT DIVSNKDR