| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48793 |
|---|
| Symbol | |
|---|
| ID | 7195103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011687 |
|---|
| Strand | + |
|---|
| Start bp | 256936 |
|---|
| End bp | 257762 |
|---|
| Gene Length | 827 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183330 |
|---|
| Protein GI | 219126157 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.940307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTATG TGTTTCTCGC CGTAACGTTG ACTTGTATTG GAATCTCGAT CGGTAAAATA
CATTCGCTAT CACCGTACCA GAACGCAGCA GCACACGATG CCGTCTCCCG CACGAATCAA
TTGGGAGACA CCAAAGAATG GGGGATAAAG TCCAAGCGGA CTGTGACTAC TCGGACAATA
GAACATCCAT TTACCTTGAC TACTGAGGAT GAAGTGCACA ATGTTCCGAA CCATGATCAC
CACCAGGACA TGCCGGATCA AACAGATGGT GGACATGCGC ACGACAAAGA TAAGTTTTGT
TCCGGTATGA TGCCCATGTC CATGTTTATG GACGGCTTTC GTGTCACTTT GAATCGCCCA
GAGAACGATT GCCTTATGTA TTTTGTCCAG TCTTGGACGC TGAAAGATGC CGACAGTTTC
AAAGGCGCTT GCGTTTTCTC CTTTTTACTG GCAGTCTTTC TGGAAGGACT CTCGGCGGTA
CGTTCTACTG TTCAACGGAA CACGTCCCAA CCTCGATGGA CCCGCCACGG ACTATTAACT
GCAATATACG CCGTCCAAGC GCTTTTGGGT TACCTTGTCA TGTTTCTCGC CATGAGCTAT
TCCATCGAGC TCGTATTCTC GGCCGTGTTT GGCTTGGCGT TCGGGAATCT AGTATTTTTT
CGGTACGAAA GTTTGGCTCC CCAACCGCGT TCCCATCCGG CCGCTCCCAG TCGTCGCGAT
ATCAGGAATG CTCGTGACCA CAAATCCAGC GTCAACTGCG GAATATCTGA GGGTCTGCAT
GAACCGCTGC TGGTAAATTC TTTTAATAGT AAACGCGATT GACTGTG
|
|---|
| Protein sequence | MRYVFLAVTL TCIGISIGKI HSLSPYQNAA AHDAVSRTNQ LGDTKEWGIK SKRTVTTRTI
EHPFTLTTED EVHNVPNHDH HQDMPDQTDG GHAHDKDKFC SGMMPMSMFM DGFRVTLNRP
ENDCLMYFVQ SWTLKDADSF KGACVFSFLL AVFLEGLSAV RSTVQRNTSQ PRWTRHGLLT
AIYAVQALLG YLVMFLAMSY SIELVFSAVF GLAFGNLVFF RYESLAPQPR SHPAAPSRRD
IRNARDHKSS VNCGISEGLH EPLLVNSFNS KRD
|
|---|
| |