| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48786 |
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| Symbol | |
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| ID | 7195100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | - |
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| Start bp | 235859 |
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| End bp | 238738 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183448 |
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| Protein GI | 219126404 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGAAG TACCACCAAG TTCAGCTCAG CATGAAACGC TTTCCGAGGA GGACTTTCCG
CTCACCTCCG ATCGCCGACG GCCCCGAGAA AAGACTTCGG TATCGAATTG TGTAATGCCA
CGGTTTGCTT CTTGCTCTAC GATAGTTTTT GTGTCCCTTT TCTTGTTCAT AAGTGGCAGT
TCATGCTATG CTTTATCGTT GACTTCATCG GCGTCCCTTT CGTCTTCTCG ACTGTCATCG
AAGGCGCTTT CTTCGCAATT GCTGGCGCCG ATGGATGTTT CTCCGCCGTG GATGGAAGCG
GCTCCCGTAG TTTGGAAACA TCAGTTGGCT ACCCTTCACA TGAAGGTTTC CGGACGAATG
CCGGTAACCC ACATGTTCCT CCCTACACAG AAGCTATCGG CAGTGGCCTT GTCGCGCTCG
GACTGCGCCG GCACACGGCA CTACCGTTCG TCGGAAGAAT TGAAAGACGA ACACCTGCAA
CTCTGCCGTC GTGGACCACG GGGGACTCTC GGGTTTGAGG TCTGCGAAAG CACCGCACTC
GAGGCATCCC GTTCCAGCGT CGATTCGCAT CAATGGAATG TTCCCCAAAC CTGGAACGCG
CTGACACCGA GTGGACGAGG CAATCGTATT TGGGGCAGCG ACAGTGCCAC TTGGAGTGGT
GCTGTTGCGG ACTCGGCCGC CGCACCGCCT CTTTCCAGTA CGACGCTTTG GTTACCGTGG
ATACCCACTC GTCAACAGAT TGAAGATCTA AAAGTTGTGG AACTGAAACA AGTGTGTGCC
GAACGAGGAT TGCTGCGCAC AGGGAACAAA GCAATCCTGC AAACTCGCCT TCTGGATTGG
ACTCGTGAAC AAATTACTCG CAATGTACAA ATGTCGAGCT CGGGTCTCAG TTTTTTGGAT
ACCAGCGAGC CAGTTCTCGA GGAGGAGGGA AGAGAGATGC GCCCATCCGA TCAACCGACC
ATGCAGGCGA ATTCGCTGGC AGAATGGGCA CGTACCGTAG ATTTAGAGCC GCTTTTACAA
CGGAGAGAAA CTATCCATCG CGAAAAATTG GAAGGGAAAC CTATTTTAAA GCCGTCACGC
CAGACCCAGA CCGTTAACAT GCCGCGTCAA GAATACCTTT CCGTGCTAAC ACGAGTCTTT
GAAAAGCCGT CGTCGCCGTA CTCGAATCGA GAAGTAAAGC AGATGTACGC AGCCTCCAAG
CAAGCCGATC AAGTTGGCGA CCGAGATCTT GCGAAACGGT TACTGCAAGA ACTCGTTGTC
GCAACTCCAC ACGATGCGCG GTTGTACCGC CGTTTGGCAC GAATGTACAA GGAAGAGGGC
AACGTTTCAG CGGCACGCGC AATACTCCAA CAAGGCATTC GCGACCATCA CGCAAAAAAT
GGCTATTTGT GGCACGGATT GGGAAGTATG GCAACCTCAG ATGCGGACGC CAAACACTAC
TGGCAGAAGG CGATTGAAGT GGATCCGGCC CTGCCACATC CGTATCACTC GCTGGGGACT
CTTGAACATA AGGAAGGTCG GATCGCCAAT GCGATGAAAA CCTTGCAAAA GGGTGTTGCC
TACTGCCCCA CCTCTCATCG TCTACACCAC GCCTTGGGTG AATTATATCG CGACGCGAAA
ATGCTCGACA TGGCGGCAAA ATCATATCAT CGAGCGATCC AGCATGGACC GCCTGTAAGC
CACGGTTTTG CATTCACTGG CCTCGCATAC GTGGCGTACG AACGAGACGA TATACATGGT
GCTCGAAGAT GGCTGCGAAA GGCAATTGTA CTCAACAAAG GCCGGCATGT GAACAGTTGG
GTTGCCTTGG CACAGATGGA AGAAAGCATT GGTGATATAG ACTCTGCACG CGCGACTTGC
GTGGCTGGTC TAGCTCAGTA TGAACGGGGC TTATTACAAC GCAGCAATCG TGGTCGACCA
TGGAAACCGA CAACGGAGCG AGCCTTCCTG GAGGATCCGG TGGCTCTAAA GGACGAGTTT
TTGCGGCAGG TACCCGTGTA CAGATCTGGC GATCGCTTTT TTAATTTGTA CCGCAACTGG
GCACGGCTGG AAGAACGATA CGGAAATCGG GACTCGGTGA AGGAAGTTTA CAGGCGAGCG
ACTGTCGCCT TTCCGAACGA GTACAGATTA TTACTAGACT GGGCGCAATA TATGGTGAAA
GAACAGCGGG ACGAGACGGC TAGGCAACTC TTCGCGAAAG CTAGCACGAA AGCTGCTTCG
AAACATGCAG ATCCTCATCG AGTGTACGCT GAGTTCGAAA TGTCACGAGG TAGGTATCTG
GATGCCCGTG AGATTCTTTA TCGTGGTGCC ATGGTATTGT CCAAAACGAC CGATAGTGGC
GGCAGCGCTG GAAATCGATA CGGACTTGCG GAACTTTTTC ATACCTGGGC TGTGTGCGAA
TGGCATTTAA ACGAACTATC TCGTTCCGAA AGTCTGTTTG ACCATGCGCT GCGTATGACC
AATGCCGGTG AGGACGGTTC GAAACTGCGA TCACTTATCT TATATTCGAT GGCTCGGCTG
CAATATTATC GAGGCGAGCA CTTGCTAGCA CAGCATTGTA TTGGTTTATG TCTCAAGGAA
AACCTAATGC CCGGAGGAAA TTCCAAGATC TGGGATCTTT GGTCTGATGT CGCTACTCAA
ATGGGCAATC CTTCACTTTC ACAAAGATGC CAGGAGCAAT CAGAGGCATC GAAGTCGAAT
GAAAACGCCA ACGGGACAAC CGAGCTTTCG GGACTGTTAG AGCACCCTTC AGGTTTGACG
CGAATGAAGG GACCGGACAT GGAGCAGCTA ATGAGACGAG ATCCTTGGCA TCGAAAGATC
TTTGGGACAC CACTGCGGCC TACTGCCTCT CTAGGGGTCA ATTTGCCGGA GGTTCTATGA
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| Protein sequence | MQEVPPSSAQ HETLSEEDFP LTSDRRRPRE KTSVSNCVMP RFASCSTIVF VSLFLFISGS
SCYALSLTSS ASLSSSRLSS KALSSQLLAP MDVSPPWMEA APVVWKHQLA TLHMKVSGRM
PVTHMFLPTQ KLSAVALSRS DCAGTRHYRS SEELKDEHLQ LCRRGPRGTL GFEVCESTAL
EASRSSVDSH QWNVPQTWNA LTPSGRGNRI WGSDSATWSG AVADSAAAPP LSSTTLWLPW
IPTRQQIEDL KVVELKQVCA ERGLLRTGNK AILQTRLLDW TREQITRNVQ MSSSGLSFLD
TSEPVLEEEG REMRPSDQPT MQANSLAEWA RTVDLEPLLQ RRETIHREKL EGKPILKPSR
QTQTVNMPRQ EYLSVLTRVF EKPSSPYSNR EVKQMYAASK QADQVGDRDL AKRLLQELVV
ATPHDARLYR RLARMYKEEG NVSAARAILQ QGIRDHHAKN GYLWHGLGSM ATSDADAKHY
WQKAIEVDPA LPHPYHSLGT LEHKEGRIAN AMKTLQKGVA YCPTSHRLHH ALGELYRDAK
MLDMAAKSYH RAIQHGPPVS HGFAFTGLAY VAYERDDIHG ARRWLRKAIV LNKGRHVNSW
VALAQMEESI GDIDSARATC VAGLAQYERG LLQRSNRGRP WKPTTERAFL EDPVALKDEF
LRQVPVYRSG DRFFNLYRNW ARLEERYGNR DSVKEVYRRA TVAFPNEYRL LLDWAQYMVK
EQRDETARQL FAKASTKAAS KHADPHRVYA EFEMSRGRYL DAREILYRGA MVLSKTTDSG
GSAGNRYGLA ELFHTWAVCE WHLNELSRSE SLFDHALRMT NAGEDGSKLR SLILYSMARL
QYYRGEHLLA QHCIGLCLKE NLMPGGNSKI WDLWSDVATQ MGNPSLSQRC QEQSEASKSN
ENANGTTELS GLLEHPSGLT RMKGPDMEQL MRRDPWHRKI FGTPLRPTAS LGVNLPEVL
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