Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48773 |
Symbol | |
ID | 7195048 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | + |
Start bp | 205796 |
End bp | 206760 |
Gene Length | 965 bp |
Protein Length | 154 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183317 |
Protein GI | 219126130 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.879862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCCCTAGAAA AAGCAAGCCG AAGCCGTCAC CTAGATTGAT CCACTCACTT ATCGCGATTC CAATGCATTC GCTGTCAGCG ATTGACGAAT TTGATATTCG AGCTGCATTT GAAGTGCTCG ACGATGGCGT ACAAGGTCGG ATCAGTCTCG AAGATCTTCG CACTCTTTAC ATTGGTCTAG GCTTTGAGCC GATGCGGATG ACTTTGGAAG AACTGGGAGG AAAATTGGTT GCAAACTTGG TGGACGTCGA GAAAAACGGC GTGTCCATCG ACACAGCTCT GTTGGTCCTT TCTCGAGTAA GTATTTCCCC CCGACTCGCA AGAAGTGAAC ACAATAACAC GGATACTGAT GCTATAATCA CGCCCACCAC GCTCACAGTA TAAGCGAAAC AGAGAGCTAA ATATGCAGTC TACCTTCGAT TTGATAGATA GTGGCGGGAA AGGATATTTG ACAAAAGATG ATGTTCAACG ATTGGCGCAG GACGTGGGCG AGCCTGTATC ACAGAAACGT GCGAAAGTCT TGGTTTCCCT CTGCTCATTG GACGGTAAGA TCGATATTGA CGATTTCAAT CGACTATTTT CACCACCCAG CCCGCCTGTG ATGGAGTAGT CAGGTCCGAA CGACCTTGTT TCTCACCGAC CACGACGAAA GGAATTTTTA AACTGCTTTC TTTGATTGTG AAAGCTTGCG GACATCGCGA AAATGAAACA AGTCAAAAAT GCTTCTGGTA CCAACTTTCG ATCAAAGCGC GCATACTTAA TCGTTGGGTC AACAAAAGTT TGTGAATCCT AGGCGTCTCA ATGCCTTGCT CTAATGAGTT ACTTCCGAGC GACAGCGGTC ATCTTCCGGC ACCCTTTCTG TAAGGCAGAC CCTTCAAAAT TTCTCTAAAC GCGCCTCTGG TTGTAATGCG TTGCGCGGTC GAACACAAAT CGTACAATCT ATATGTAGGA GACAAGTAGA CTCTC
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Protein sequence | MHSLSAIDEF DIRAAFEVLD DGVQGRISLE DLRTLYIGLG FEPMRMTLEE LGGKLVANLV DVEKNGVSID TALLVLSRYK RNRELNMQST FDLIDSGGKG YLTKDDVQRL AQDVGEPVSQ KRAKVLVSLC SLDGKIDIDD FNRLFSPPSP PVME
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