Gene PHATRDRAFT_48773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48773 
Symbol 
ID7195048 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp205796 
End bp206760 
Gene Length965 bp 
Protein Length154 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183317 
Protein GI219126130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.879862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCCCTAGAAA AAGCAAGCCG AAGCCGTCAC CTAGATTGAT CCACTCACTT ATCGCGATTC 
CAATGCATTC GCTGTCAGCG ATTGACGAAT TTGATATTCG AGCTGCATTT GAAGTGCTCG
ACGATGGCGT ACAAGGTCGG ATCAGTCTCG AAGATCTTCG CACTCTTTAC ATTGGTCTAG
GCTTTGAGCC GATGCGGATG ACTTTGGAAG AACTGGGAGG AAAATTGGTT GCAAACTTGG
TGGACGTCGA GAAAAACGGC GTGTCCATCG ACACAGCTCT GTTGGTCCTT TCTCGAGTAA
GTATTTCCCC CCGACTCGCA AGAAGTGAAC ACAATAACAC GGATACTGAT GCTATAATCA
CGCCCACCAC GCTCACAGTA TAAGCGAAAC AGAGAGCTAA ATATGCAGTC TACCTTCGAT
TTGATAGATA GTGGCGGGAA AGGATATTTG ACAAAAGATG ATGTTCAACG ATTGGCGCAG
GACGTGGGCG AGCCTGTATC ACAGAAACGT GCGAAAGTCT TGGTTTCCCT CTGCTCATTG
GACGGTAAGA TCGATATTGA CGATTTCAAT CGACTATTTT CACCACCCAG CCCGCCTGTG
ATGGAGTAGT CAGGTCCGAA CGACCTTGTT TCTCACCGAC CACGACGAAA GGAATTTTTA
AACTGCTTTC TTTGATTGTG AAAGCTTGCG GACATCGCGA AAATGAAACA AGTCAAAAAT
GCTTCTGGTA CCAACTTTCG ATCAAAGCGC GCATACTTAA TCGTTGGGTC AACAAAAGTT
TGTGAATCCT AGGCGTCTCA ATGCCTTGCT CTAATGAGTT ACTTCCGAGC GACAGCGGTC
ATCTTCCGGC ACCCTTTCTG TAAGGCAGAC CCTTCAAAAT TTCTCTAAAC GCGCCTCTGG
TTGTAATGCG TTGCGCGGTC GAACACAAAT CGTACAATCT ATATGTAGGA GACAAGTAGA
CTCTC
 
Protein sequence
MHSLSAIDEF DIRAAFEVLD DGVQGRISLE DLRTLYIGLG FEPMRMTLEE LGGKLVANLV 
DVEKNGVSID TALLVLSRYK RNRELNMQST FDLIDSGGKG YLTKDDVQRL AQDVGEPVSQ
KRAKVLVSLC SLDGKIDIDD FNRLFSPPSP PVME