Gene PHATRDRAFT_48767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48767 
Symbol 
ID7195043 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp192923 
End bp194021 
Gene Length1099 bp 
Protein Length314 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183312 
Protein GI219126120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.977253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGT CCAAGACCGC CGCAAGCGAC GTGCAGCAAC AACGCTGGCA AAAAACCCAG 
GACGAGGACA CATTGCACTC CCTGTTTGAG AGGAAAAAAG CATCCATTCC CAAGAGTATC
TGCAATCAGA CACTTTATTT GTACACTTTT AGCAAAAATA ACTCTTCATC TCATATACAG
TTTGGAAATG TTGACGGCTC GTACTTTCTT ACGCTCGACC TTGTCGCTTC CGCAGCAGCG
TCATGCTTGG GAGTCCACCG GAGTCCGCAC CTTGTCATCC AAAAAGCCCG TGGCTCCGGC
AACGGCGAAA GCAGCGGTGG AGGAAGATGT AATTTCTCCG GTAACTGTGC GTCGTGCGAA
AATGTCCAAA ATTGATAGGA ACATGGTGTT CGGTACTACG GGAAAGTTCC TCGCTCCCGT
CCTACCAGAG AATCCGGCGG AAATCTCCGC GCTGGACCCT GCCGATCAAG GCCACCGGCT
CAAAATGGAC GGGACCGCCC GGGTCGTTAT GATTCGCCAG GAAAGGGCTT CGAATCGCCA
ATCCCCACTC AAACACGAAA AGTATTGGCG TATCTTTTTC TACGAAGACG GCATGGTGGC
GGAAAAGTGG ACGAATTCGC TCATGGGTTG GACTTCGAAC GGCGATCCCT ACCAATCAGC
GCCACCGTTG ATCTTCCCCA ACGCGGCCGA TGCGGTGTAC TTTGCAAAAA AGCGGGGTTG
GAATTTTGTA GTCAAGCAAC CCATCATGCG TGACCCACGC GAGGATGGTG CTCAGTACCA
AGACAACTTT TTGCCCCTGG CCGTGGCGGC CAGGGTCCAA AAGGAAGGTG TGTCGTGCGA
TCAGTGGGCC CGGGATCACG CCGGTACATC CAGCTACTTC CGCCCGCTCA AATACCACGG
TGATGGCCTC GTGCCACAGC ACGGACCCAA CGGAAACGCC CCGATCGCCA AACACGTTCC
CGGCTACTAC AAGTTGCGAT AAACTTTTTA CAATGCTGCA CTGCACCCAA CCGGTAGGTT
TGAAACAAAA GTACTGGAAT TGAGGAAGGA GGGTAGAGGC GTAGGAATGA ATGAAAAATA
AGAAATTGTT GCGTAATGG
 
Protein sequence
MKRSKTAASD VQQQRWQKTQ DEDTLHSLFE RKKASIPKTK ITLHLIYSLE MLTARTFLRS 
TLSLPQQRHA WESTGVRTLS SKKPVAPATA KAAVEEDVIS PVTVRRAKMS KIDRNMVFGT
TGKFLAPVLP ENPAEISALD PADQGHRLKM DGTARVVMIR QERASNRQSP LKHEKYWRIF
FYEDGMVAEK WTNSLMGWTS NGDPYQSAPP LIFPNAADAV YFAKKRGWNF VVKQPIMRDP
REDGAQYQDN FLPLAVAARV QKEGVSCDQW ARDHAGTSSY FRPLKYHGDG LVPQHGPNGN
APIAKHVPGY YKLR