Gene PHATRDRAFT_48766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48766 
Symbol 
ID7195042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp191708 
End bp192748 
Gene Length1041 bp 
Protein Length239 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183311 
Protein GI219126118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGA ATCCGCGAAC TCGAACCCGT TCCGAAACCC AGAAGAATTT ACAATCACTG 
CAAGGTCAAA GCCGGAAACT ATTGACTCTT TCCGAACAGG CAACCCCGTA CTTGCATCAG
AGAAACGTCT CATTCTGGAA GTACCTCGTT ACCATGACAG ACGTACCAGC AGGGTCATGG
ATCTTGGACG AGGGCAAACG CGAAGTCTTT TTAGTGACGG CAGTATCAAG CGATGGAACC
AAGCACGGCA TGATCATCAC GTGGGTTGCA CCAGCCGGGC TAGTGCCCGA TCAAAAGCGC
ATTATGATGG CCTTGTCGCC CACCAATCAA ACCACGCAAA CACTAATGGA ATCCAAATCG
TTTGCCATTC ATCTATTGCA GCAAGCTCAG GCGAATCTCG TACCGGTTTT TGGTGCCAAA
CACAGTCGCG AAGTAAATAA ATTCGAGGGC GTCGACCACG AAATGATGGA TGGTCTCCCA
ATTCTTGCTA ATACTTGTGG TTGGATGATT GGCGCGGTAG TATCGACGAT GGAAGCCGGA
GATCGCGTGA TTGTTTTGGC TGATATTTCG AAAGAGCAAG GAGCTGTCGA GCAAGATCCA
CTGTACGTGA AAGATATGTC GGCAAAGTTA CCGGTCGGGG ACGTTCAGGA TTTGGACCAA
AAGTTCAGCG GCGACATCGA CCGAGATCGG CAAATGCGGG CCAAATTCTA CGAACCATAA
AACGCAGGGG ACTGCTTAAG AATGCCTTTA CGAATAGATT TACAAGGGCA ATTAGAGAAC
AGTTCCGCGT ATACTTGAAC TTGACTGACA GTGAACAACT TGACTGGATA TATACAAATC
TGCGAAAATG ACGCGTCGTT GCAGAGAGAG GCAGGCTGCC CCCTCATCAA GACACCGAAG
CACAGTGCTA TTCGGGGACA TCAAAGAACC ATTTATTCTG CTTTGATGAC GATTTTATTC
CAACCGTTTA TTTTTGCTAC CAGCAGAGAC TACACACGTA CCTAATTTGT TTAAGCTTAA
TCTAATGAAT TGCTGGCCGG T
 
Protein sequence
MQQNPRTRTR SETQKNLQSL QGQSRKLLTL SEQATPYLHQ RNVSFWKYLV TMTDVPAGSW 
ILDEGKREVF LVTAVSSDGT KHGMIITWVA PAGLVPDQKR IMMALSPTNQ TTQTLMESKS
FAIHLLQQAQ ANLVPVFGAK HSREVNKFEG VDHEMMDGLP ILANTCGWMI GAVVSTMEAG
DRVIVLADIS KEQGAVEQDP LYVKDMSAKL PVGDVQDLDQ KFSGDIDRDR QMRAKFYEP