Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48766 |
Symbol | |
ID | 7195042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | + |
Start bp | 191708 |
End bp | 192748 |
Gene Length | 1041 bp |
Protein Length | 239 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183311 |
Protein GI | 219126118 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAGA ATCCGCGAAC TCGAACCCGT TCCGAAACCC AGAAGAATTT ACAATCACTG CAAGGTCAAA GCCGGAAACT ATTGACTCTT TCCGAACAGG CAACCCCGTA CTTGCATCAG AGAAACGTCT CATTCTGGAA GTACCTCGTT ACCATGACAG ACGTACCAGC AGGGTCATGG ATCTTGGACG AGGGCAAACG CGAAGTCTTT TTAGTGACGG CAGTATCAAG CGATGGAACC AAGCACGGCA TGATCATCAC GTGGGTTGCA CCAGCCGGGC TAGTGCCCGA TCAAAAGCGC ATTATGATGG CCTTGTCGCC CACCAATCAA ACCACGCAAA CACTAATGGA ATCCAAATCG TTTGCCATTC ATCTATTGCA GCAAGCTCAG GCGAATCTCG TACCGGTTTT TGGTGCCAAA CACAGTCGCG AAGTAAATAA ATTCGAGGGC GTCGACCACG AAATGATGGA TGGTCTCCCA ATTCTTGCTA ATACTTGTGG TTGGATGATT GGCGCGGTAG TATCGACGAT GGAAGCCGGA GATCGCGTGA TTGTTTTGGC TGATATTTCG AAAGAGCAAG GAGCTGTCGA GCAAGATCCA CTGTACGTGA AAGATATGTC GGCAAAGTTA CCGGTCGGGG ACGTTCAGGA TTTGGACCAA AAGTTCAGCG GCGACATCGA CCGAGATCGG CAAATGCGGG CCAAATTCTA CGAACCATAA AACGCAGGGG ACTGCTTAAG AATGCCTTTA CGAATAGATT TACAAGGGCA ATTAGAGAAC AGTTCCGCGT ATACTTGAAC TTGACTGACA GTGAACAACT TGACTGGATA TATACAAATC TGCGAAAATG ACGCGTCGTT GCAGAGAGAG GCAGGCTGCC CCCTCATCAA GACACCGAAG CACAGTGCTA TTCGGGGACA TCAAAGAACC ATTTATTCTG CTTTGATGAC GATTTTATTC CAACCGTTTA TTTTTGCTAC CAGCAGAGAC TACACACGTA CCTAATTTGT TTAAGCTTAA TCTAATGAAT TGCTGGCCGG T
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Protein sequence | MQQNPRTRTR SETQKNLQSL QGQSRKLLTL SEQATPYLHQ RNVSFWKYLV TMTDVPAGSW ILDEGKREVF LVTAVSSDGT KHGMIITWVA PAGLVPDQKR IMMALSPTNQ TTQTLMESKS FAIHLLQQAQ ANLVPVFGAK HSREVNKFEG VDHEMMDGLP ILANTCGWMI GAVVSTMEAG DRVIVLADIS KEQGAVEQDP LYVKDMSAKL PVGDVQDLDQ KFSGDIDRDR QMRAKFYEP
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