| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48753 |
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| Symbol | |
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| ID | 7195008 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | - |
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| Start bp | 154896 |
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| End bp | 159190 |
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| Gene Length | 4295 bp |
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| Protein Length | 1110 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183431 |
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| Protein GI | 219126368 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.301248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GAGTAGGCAA CAACAACCTT TAATTTGCCT GTCCTTTTGG AGCGCTGTCG AGAGAGAAAA
AACTCACCAT GTACTCTCCA ATTCTTCTCG GCTCAGTCTT TCTCTTCTTA AATGCGGTGG
AATGTAAGGG TAATTTTATT CGTGGCAATT CATCGGCGTC GAGCCAAGCT TTCGATTCGG
AAGAAGCTGT GCCGTCCTCT TCTCGGCGTC TCGCCCGAGG ATTTGTACCT TTGAGCTGCA
ACGCCAACAT TGATAATTCC AAATGTTCTT CCTTCATCGA CACATTTGGC ACTAACTCTG
TTCATGCATC GAGGCTCGTT GTTCCGTGCG GTACTTGCGT TTCGATGGAT CATCCGGGCC
CACTACTAAC GCTGAACGAC GGCATTGACA TTCAAGGTAA ACTGGTGTTT CCGGATGGTT
ACCGGCTCAC CGTCAACACC AACTTGGTGC TGGTCCAAGG AGAGCTAGAA ATGAAAAGCT
CTAAAGCAGT AGATGGAATC CCCGATGTTA CGTTTGTTCT CCAAGGCTCC AGCATCAGCT
CCTTTGAACC GATCGACAGC AATACTGGCA ATTGTGGAGG GTCCTGTGAC ACAGGAGCTC
GATCGATTAC AGTTGCCGGT GGGAAAGTTA ATCGTAAGTT CAGATCGCTC AGACATTTGA
CAGCACAGTT GTCGGAGGTT GCTTTACGAC TGGCACTCAA AAAACCACCT CTTTCAATGT
TTTGTAGTTA ATGGTCTTCC TGCCAACACA CCGACGTGGC TACACATCTA CGACGTTATC
GGTAGCTCCG CTATCGTAGT GTCCAACTCC GTCCGTGACA AATGGGTTGC CGGGGCAACC
ATAGTCATCA CTTCCGAGCA CCAAGGCTTC TTCGGCGATC AAGTCCGTAC CATCTCAAGC
GTCTCCGATG TTGGCTCAGG TAGGGTTCGT CTCAACCTCG ACAAAGCCAT CAACCGCCCG
GTAACGCTTC TCGATAGCCC AGACTCTGCA ACCGAGGTTG CCTTGCTTTC TCGCAACATT
GTCTTTCAAG GCGCCTCCGG TTCGGATGGT GGTCACTTTT GGATCATGCA CACTCCCAGT
GTGAACCAGC GCATTGAAGG AGTGGAGATC GTCAACTTTG GACAGGAAGG GCTCCTGGGA
CGATACCCTG TCCATTTTCA CATGTGCGGG GACGTGTCGG GCTCGGTGGT AGCCAAAAAT
ACTATCCGTA ATTCCAACCA ACGCTGCGTT GTTGTGCACG GTACCGATAA CCTTCTCGTC
CAAGAGAATG TTGCCTATTC CACCAAAGGT CACTGCTACA TGCTGGAAGA CGGCATCGAG
ACGGGCAACG AGTTTGTACG AAACATTGGT ATCCTGACTG TCAAGGCGGA TGTCATCATT
CCCAACATGG GCTCCAACGG CGTGGAAACG GACATGTCTG CCAGTACCTT CTGGATCACC
AATGCGGACA ACTCGTTTGT TGGCAATGTT GTAGCTGGAT CGCAAGTCTT TGGTTTTTGG
TTCGAACTTC AGGTACGCGG AAGCCTGGCC AATGAGCACC AAGACTTTGA CCCCATGACG
GTCCCGACTC GAAAGTTTGA AGGCAATGTC GTCCACAGCG TATTTGGGGT AGGATTGACC
TATTACTTGC ACGGATACAT TCCAAAGACG CTGCAGTATT TTGAGAACAA CAAGTTCTTC
CGTAACCGGC ACATTGCACT TCGTATCCAT CGGACTCGAA ATATATTTCT AAAAGGCAAC
ACATTCTCCG ACAATGCTTT CGCAATTGTG GTCGATCGCG CCGAAGAAAT TCACGTTGCC
GACACTACAA TTGTTGGTCA CTCGGATGTC TTTGCGGAGG TGGTGAAAAG GAATCGCTTT
GCCAATATGC GATGTCCACA AGGCATAGGT TTCCAGTCAA CCAACCCGTG GGTTCGAAAG
ATGGATTCCG AGCTGAACGG TGTTATCCTG GATCAAGTGG CATTTTCTGG GTTTTCCAAA
TCCGTGTGTT CTGATGCAAC CGCAATCGAT CTGACGTCTC GACTAGACGG CTACAAATCC
TTCGAAATGT TCTCCAGGTA CACCGGTGTG ACCGTAGCCG ACACGGACGT GATCAATTTT
TGCAGCGGAA AGTCAGCTGG GGCAGATGAT GTGTACGTGA CCGATTCGAC GGGTACTCTT
CTTGACGGCA CCGACAATAC TCCGTCCACT CTGATGGTCA ACTCGCCCGA GATGATGCAC
TTTGTGGAAC CAAGTGTTTG CACGGAGAAC AAAGATCGTT GCTACACCTA CTGCAGTGAC
ACTTGCATCC GCACAGTGCA CTACTATGTC CCAGAGAGCC AAAGCCAAGA TTACACTCTC
AAGGTGTGCG ATCGTGGCAA CACTTCCGAC TGTATTGAGC TCTCCGGTCA TGTCCACAGT
AGTCACCGAT GGCCCCGCCG ATTTGCCGTG CATGTCCCGT CGGGGCGACA GTACGACGCA
GTCTTTCTGA ATAAGGGAGT GCCTGTGTAC CCAACCAACG TCGACATTGA GTTCCAGGAG
AAGCTTTGTC CAACGGCACC CAATGATGAA GACATCGTTC TTCTCGAGAA GGCTCGAGGA
ACAACCTTTC CTCCAACATC CAGCCCGACA ACATCCCTCG AGGCCTGCGG TAATCTGATT
GCGAACTCGG ATTTTGAGCG CGGATACGAC GGGTATTGGG ATGCAGCCGG CGAAGGTAGT
TTGTCCAATG TAGCTGGCTA CAACTCTCCA ACAGCCATGT ACTACGACTC TGGCAATCGT
AACCGATACT GGACAGGACC AGCACATAAA TGGCGAGACG GATTAGATTT CCAGTGTCTG
ACTCAGGGTA CAACATGGAA GTTTTCTGCT CGCATGAAGC TTGTCGACAA AGAAACTGGA
AAGGGAGCAT CCTGCAATAC CGGTTCTACG GCGGAAGGCG AAATGTGCCC TCGGGTGACA
CTCGTGCTAC GCGATAAATC TTGGACTCTG CATACTGTGT ACGTTAGAGG TTTCAACAAT
GGGGACAATT GGGATGCTGA CGGTTTCAAC GCGTTCGAAG GATATTGGAC CATTCCTTCC
AACGACCCGG GTTGGCAAGG AAATGTTGCC AACATCCGTT TATCCATTAC GGACTTTGCG
TTCGGAATGA ATTTGATTGT CGACGATTTT GGAATGGAAG TGGTGCTTGG CTCGGATGTG
GATACTGGTA AATCACCAAC TTCGAGTCCG TCTCTAGCAT TACCCTCTCC GACCCGAAGC
CCAACCAGCA GTCCAACAGA AACTAAGACC GGTACTCCGA CACACGGTCC GACGCAAACT
TCCACCCATA GTCCAACTTC TCGTCCTACC AAGGTTCCGA CCGACAGGCC CACCCCCAGT
CCAACCAAAC TTGCAACCGG CCTTCCAACA GAGAGTCCAG TCATGAGTCC TTCTGTAGGG
GACCTGGACT CTTGCTCCGA AGTGATTGCA AATTCCGATT TTGAACTCGG ATCCAAGGGA
TACTGGTCCA CCCACAATGG CGCTAGTGTG TCGGATGTGG AAGGCTTTAC TTCGTCCACG
GCCATGTATT ATAATTCCGG AAACCGCAAA CGATACTGGC AGGGACCGGA GTACAAGGGT
GGCATTGACC TTAACTGTCT GGAGCAGGGC ACAACATGGA AAATAACGGC CAAACTTCAA
CTTGTCGATG TCTCAACGGG GGAAGGCAGT TCTTGTGTCG TTGGTTCCAA CAATGCGAAA
GAACGGTGCC CGCGCGTACG TCTCGTTCTC CGCGACGGAA CGTGGACGCT TCGACAGGAG
CGCATCGATG GATATACGGA TGCGGAGAGC TGGGACACCA ACGGCATGAA TTCCTACACC
GGTTACTGGA CGGTCCCGGC AGATGGTCCG AATTGGAATG GCAAAGTCCG CAATTTCCGT
TTGTCGCTCG TTGATTTTCC GTTCGACACG GATCTAGTCG TTGATGATTT CAAGATGACG
CGTGTCTCCT AAGAACGGTG CAACGACACG GTACGCCATC GACCCGCGTC CGCGAAGAAA
CAATCTCACG AACAATCCAA CCAGCGAATT GGAACTGATG TTCGTCATTC ACGGTCATAC
ATAATCATAA ATGCATAACA ACTAATATTT CCGAGAAGGA ACCATATTCA TTTTTCTTTA
TCGCTTCGCC CAATTTCACT ACAGAGAAAC AAGTCACTTT ACACTAGAAA GTCAGTGAAA
TCGACAGTGA CTGCTGTTGT CGTATTAGCT GCAGACGGAC CTTGACGGTA GAGCGAGCCC
TTTCTTTCTA TTGTTCGTCG TGGATCGAAC CTTGC
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| Protein sequence | MYSPILLGSV FLFLNAVECK GNFIRGNSSA SSQAFDSEEA VPSSSRRLAR GFVPLSCNAN
IDNSKCSSFI DTFGTNSVHA SRLVVPCGTC VSMDHPGPLL TLNDGIDIQG KLVFPDGYRL
TVNTNLVLVQ GELEMKSSKA VDGIPDVTFV LQGSSISSFE PIDSNTGNCG GSCDTGARSI
TVAGGKVNLN GLPANTPTWL HIYDVIGSSA IVVSNSVRDK WVAGATIVIT SEHQGFFGDQ
VRTISSVSDV GSGRVRLNLD KAINRPVTLL DSPDSATEVA LLSRNIVFQG ASGSDGGHFW
IMHTPSVNQR IEGVEIVNFG QEGLLGRYPV HFHMCGDVSG SVVAKNTIRN SNQRCVVVHG
TDNLLVQENV AYSTKGHCYM LEDGIETGNE FVRNIGILTV KADVIIPNMG SNGVETDMSA
STFWITNADN SFVGNVVAGS QVFGFWFELQ VRGSLANEHQ DFDPMTVPTR KFEGNVVHSV
FGVGLTYYLH GYIPKTLQYF ENNKFFRNRH IALRIHRTRN IFLKGNTFSD NAFAIVVDRA
EEIHVADTTI VGHSDVFAEV VKRNRFANMR CPQGIGFQST NPWVRKMDSE LNGVILDQVA
FSGFSKSVCS DATAIDLTSR LDGYKSFEMF SRYTGVTVAD TDVINFCSGK SAGADDVDTC
IRTVHYYVPE SQSQDYTLKV CDRGNTSDCI ELSGHVHSSH RWPRRFAVHV PSGRQYDAVF
LNKGVPVYPT NVDIEFQEKL CPTAPNDEDI VLLEKARGTT FPPTSSPTTS LEACGNLIAN
SDFERGYDGY WDAAGEGSLS NVAGYNSPTA MYYDSGNRNR YWTGPAHKWR DGLDFQCLTQ
GTTWKFSARM KLVDKETGKG ASCNTGSTAE GEMCPRVTLV LRDKSWTLHT VPTSRPTKVP
TDRPTPSPTK LATGLPTESP VMSPSVGDLD SCSEVIANSD FELGSKGYWS THNGASVSDV
EGFTSSTAMY YNSGNRKRYW QGPEYKGGID LNCLEQGTTW KITAKLQLVD VSTGEGSSCV
VGSNNAKERC PRVRLVLRDG TWTLRQERID GYTDAESWDT NGMNSYTGYW TVPADGPNWN
GKVRNFRLSL VDFPFDTDLV VDDFKMTRVS
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