Gene PHATRDRAFT_48751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48751 
Symbol 
ID7195033 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp150665 
End bp151610 
Gene Length946 bp 
Protein Length263 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183429 
Protein GI219126364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.229786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCCTTTTCTC GTTGGCGCAA ACGTTCCGAA ATCACTATGA GCGTCGACAA TCGTATCGAT 
GCCGATGCGC CAACCCAAGA GGTAAGAAAC GGGACTCTTG GGGATGTGCT CTGAAACGTA
GGCGATCTCA CAGTAGAATG TGCGCTTTCT CTCTCGCTCT CAGTGGGATG TCGATCGCTA
TCAGGGACAG CACAGTTTTG TCTGGAAGCT TGGCAGTTCA CTCCTAGAAC TAATACAAGT
CAGTGACGGT CAACGCATTC TTGATGTTGG CTGTGGTAGC GGTGAGTTGA CGCAAGCCTT
GTCTCATCTA GCAAAAAACT TGGTGGTAAC GGGGATGGAT GCCGATCCGG ACATGGTCGC
GAAAGCTCGG CAACAATTTC CCAGCTGTGA TTTCTTTCAG GGCGACATGC GCAATTTTGA
GGTTCCCGAG CCCGTGGATG TTCTATTTTC CAACGCTGCC TTGCACTGGA TACCCGCCAA
GGATGCGGGA CGTGCAGTCG CGTGTATGGC GAAGGCTTTA CGACCGGGTG GACAACTAGT
CGTCGAGTTC GGTGGCAAAG GCAACGTGGA ACGGGTTGTG CAGTCTACGT TACAAGTCCT
TCAATTGCCG GCTTCGACGA CTCCTTGGAA CTTTCCTAGC ATATCCGAGT ACACAACTTT
GCTGGAAGAA AACGGCATGG AAGTATCTGC GGCTACACTT TTCGATCGGC CGGTCGTCTT
GAAAGACGGT GAAGCGGGTC TCAGCAACTG GTTACGCATG TTTGGCAGCA CCTTCTTCAA
AGGCCAGTCG GATGAGGAAA TCGACAGTAT TCTCGTCCAG ATAAACGATC TATTGAGATC
AGAATTATTC AACGGCACCG ACTGGACGGT CGATTACCGC CGAATTCGAA TCGTTGCAAA
AAAGTTGTAA AAGTTTGCAC ATGTGCATAG CCATTATCAA AAGCCT
 
Protein sequence
MSVDNRIDAD APTQEWDVDR YQGQHSFVWK LGSSLLELIQ VSDGQRILDV GCGSGELTQA 
LSHLAKNLVV TGMDADPDMV AKARQQFPSC DFFQGDMRNF EVPEPVDVLF SNAALHWIPA
KDAGRAVACM AKALRPGGQL VVEFGGKGNV ERVVQSTLQV LQLPASTTPW NFPSISEYTT
LLEENGMEVS AATLFDRPVV LKDGEAGLSN WLRMFGSTFF KGQSDEEIDS ILVQINDLLR
SELFNGTDWT VDYRRIRIVA KKL