Gene PHATRDRAFT_48728 details

Gene Information

• Locus tag: PHATRDRAFT_48728
• ID: 7195016
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: +
• Start bp: 80729
• End bp: 81593
• Gene Length: 865 bp
• Protein Length: 192 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002183285
• Protein GI: 219126064

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGAGG TAAGAACACT ATGAACTTCC GGATTTCTGT AAACAAAATG GCCTTGTGTC 
GACAAAAAGA CGGAAGAAAA GCGATGGGAA GGTCGCGTCT CCTGAGGTGG CATCCTCACG 
CCCTTGCGAC GGGTAATGAG TCTCGTTTTT TAGTAGACCG GCAACCGCTG GAAAATTCAT 
TCCTGAACAA AAACGACTCA CTTTCGCTTT TCGACACTAG ATTGAAGAAA TCGACGATGT 
CCCCGAGCTC GAAGTTCAGG AAGAAGATGA CGATGTTCCT GATTTGGAAA CCCAGGGCAT 
GGACCCCGCT ATGCTCGCTC AGGCGCAGGC CATGATGCAG CAGGAAGAGT TCAAGCAGCA 
GAACCGCAAC GAAAAGAAGT CGCGCAAAGC CATGCAAAAG CTGGGCATGC GGGCCATTCC 
GGGCGTCCTC CGTGTGACGG TCAAGAAGTC CAAGAACGTT TTGTTCGTGA TTCACAAGCC 
AGACGTCTTC AAGTCGCCCA ACGCCGACAC GTACGTTGTC TTTGGCGAAG CCAAGTCGGA 
AGACGCCGGT GCCGCCTCGC AGGCGGCTGC TGCTAAGCAA TTCCAGCAAC AGCAGGCCGC 
GTCGGCTGTT ACCAGTATGT CCCAGGCACC GGAACCCGAA GAAGAAGGGG AAGCAGATGA 
AACAGGACTG GAAGCGAAAG ATATCGAACT TGTCATGGCC CAAATCAATT GTACACGAGC 
CACTGCCGTC AAGGCGCTCA AGGAGAATGA TTGCGATTTG GTCAATGCGA TTATGAGTTT 
AACCAAATAG AACAGTGAAG CTGACCGCAT TTATTGAAAG ACGTGGTTGA CTCTTAACAT 
CATATTATTA AAAAGTTTCA CCTGC 

 

Protein sequence

MPEIEEIDDV PELEVQEEDD DVPDLETQGM DPAMLAQAQA MMQQEEFKQQ NRNEKKSRKA 
MQKLGMRAIP GVLRVTVKKS KNVLFVIHKP DVFKSPNADT YVVFGEAKSE DAGAASQAAA 
AKQFQQQQAA SAVTSMSQAP EPEEEGEADE TGLEAKDIEL VMAQINCTRA TAVKALKEND 
CDLVNAIMSL TK