Gene PHATRDRAFT_48717 details

Gene Information

• Locus tag: PHATRDRAFT_48717
• ID: 7195190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: -
• Start bp: 41338
• End bp: 43491
• Gene Length: 2154 bp
• Protein Length: 687 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002183413
• Protein GI: 219126331

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.808237
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGCGATACT ACAATGGTGG TATGTTGCTG CTTGGACTTG CATGAGGCTG TCATGTGAAG 
TGACTAGGCA ATTTAACAAT CTACATCAAC ATGAGTGAAA GCGTCTGGTC CAAGACGATT 
TTGGTAGCGC TGCTCCGATT ATTCATTTGC CTCTACGTCT TTCCATTTCT GCTGGTCGGC 
GTTCATTTAC ATGCCGTCGC TTCCTCCCAC CAGACGCTCT TCGTATATAT ACAACGTAAA 
GAATCAGGAG AAGCTATTGG TGTAGATAGG GAAACACGAA AAAATATCTA CGGAACCTCG 
CCGTCGATTG GGGGTGATAA CGGCGTCGAT GACGCTGTCA TCACGGGAGT ATACGACTAC 
GTTCAAGAAG GTTTATTCGT TTGGCGAGAG TCGCAACATA TAAAGTCGTC GTCGTGGACT 
CGATTTTCTT GGCCTGATAT TACTTCAAAC AGATTCACTT CCCCGCGTGA TGGCTTTTCG 
ATCACCGACA TTTCGTCGGT AGTAAGTCCA ACAAGGTTAA GTCGTTCCAG AGATAGCTCC 
GAGTGGTGCT TGTATGCAGG ACGGGATTGG AAAAAAGTTG CTTGTCACGA AGGATCAGCC 
GTAGTGGGTG AATACATCGA CACCGATACT GTTAGCGGTG CTGTAGACAC ATCATCGCAA 
AATGACAAGA TTCGCATACA GATCCAATAT ATTTCTTCGT TCGATCGGTG GAGACATGGG 
TCTGCTTCAT CGCCATTTGG CTACCGAACA ACAATCAAAC TTAAGCCGTG GCAGCGCATG 
CTTCTGGAAA AACCCGCGAC GCTGTTTTGG ATGGGGATCA ATATTGGTCT AGCGTTTGTA 
TATTGGAATC GGCGTATTGC AGTCTCGTCC GTTGCCAAAG TGTATAGCAA GATGATGCAT 
GATGGAGAAA TATGGCGCGG GCTGTCCGGT GCGACGGCCC ATTTCGAGAC TTGGCATTTA 
TTCTTCAATA TGCAGGCTCT ATACAGTTTG GGATCTGAGT TAGAAAGCAA TGATGGTAGC 
ACCAAATATT CCAGTGTCAC GTTCTTTATG TACACAGCAT CGCTCGTGCT TTGGACTACC 
ATTTTTTGGT TGCTTTTGGA AACACTAAAG CGACGATTTG AAAGCGCAAT GTCACCGGTC 
GCATCGGGGG ATTCTCCGAC TGTTGGATTT TCCGGCGTCT TGTTTGCCTG GATGGTGGTG 
GCCTCGCTCG AACAATCTCA GACTTGTCCA GTGCATTTTC TGCCGAGTCT GTGTTTTGTC 
ACGCACGAAT TTGTTGGCTT CCGGTTCAAC TTTGCCCCGC TCGTACAGCT TGGCATTGCT 
CAAGTGTTGC TGCCCCGTGT TAGTCTAACG GGACATTTGG CAGGAATTTT ATCCGGGTTG 
GCACTGCACT GGGGCTTGTT GCCCTTGGCA TATACGCAAC CAGCCGTTTT GTTACCCACC 
TTGTACGCGA TGTATCTGAA ATTCGTTTGT CCCACTACTC AAGTGTTTAG TACAAGGCTC 
GGCTCGAACG ACACTTCGGA CCGTGTCGCA CGATTCTCGC ACCAATGGGG GTTGAAGATC 
GTTTTGGCCA TGTCAAGCTG GACGTTTGGC GTCATGAATG CACTAACGAT TTGCTTTGGA 
CTAGTTGTTG GCTATGGGCA CTGGAATAGT GGTAAGCTAC CGAAAGATAT AAGAGTGGTG 
AAGGGGTGGA TGATCACGGT TGTCTTGGCA TGTTTATTGG ACGCTATGAG CGTAGCAGGC 
TGGACACTTT TGGTCCCTGG CGCCTCGCGC CTACCGGCAG CAATCGCACC TACGTCTGTA 
ATGGTCATCC GATGGGTAGC CTTTATGACG AGTTTGGCTG GGGCGGCTTG TCATTTGACG 
CCAACCGGTA GCACCGGTGA TAGTGGCGAT GAGGCTAATA CTAGTGGTAT ATTTGACATG 
GTACTCGGAT GGACTGTGGT CCAGCCAGCG ACGGTGTTGG CTCATGCTTG GTCCCGAGAT 
CGTGTCTTGC CGACCGGTGT CTTTGCCGGA CCTGGACAAG CGCTAGGGGG CGTGTCGTGC 
TCTACCGAGC TTGCTTCCTC GACGCGACCA ACCCGTTGGG GTGGACAGGG GTATCGTCTC 
GGTGCAAAAG TAGACGATCG AAACCATGAC ACGGAGCTCT CCGTGGTGCT GTAA 

 

Protein sequence

MSESVWSKTI LVALLRLFIC LYVFPFLLVG VHLHAVASSH QTLFVYIQRK ESGEAIGVDR 
ETRKNIYGTS PSIGGDNGVD DAVITGVYDY VQEGLFVWRE SQHIKSSSWT RFSWPDITSN 
RFTSPRDGFS ITDISSVVSP TRLSRSRDSS EWCLYAGRDW KKVACHEGSA VVGEYIDTDT 
VSGAVDTSSQ NDKIRIQIQY ISSFDRWRHG SASSPFGYRT TIKLKPWQRM LLEKPATLFW 
MGINIGLAFV YWNRRIAVSS VAKVYSKMMH DGEIWRGLSG ATAHFETWHL FFNMQALYSL 
GSELESNDGS TKYSSVTFFM YTASLVLWTT IFWLLLETLK RRFESAMSPV ASGDSPTVGF 
SGVLFAWMVV ASLEQSQTCP VHFLPSLCFV THEFVGFRFN FAPLVQLGIA QVLLPRVSLT 
GHLAGILSGL ALHWGLLPLA YTQPAVLLPT LYAMYLKFVC PTTQVFSTRL GSNDTSDRVA 
RFSHQWGLKI VLAMSSWTFG VMNALTICFG LVVGYGHWNS GKLPKDIRVV KGWMITVVLA 
CLLDAMSVAG WTLLVPGASR LPAAIAPTSV MVIRWVAFMT SLAGAACHLT PTGSTGDSGD 
EANTSGIFDM VLGWTVVQPA TVLAHAWSRD RVLPTGVFAG PGQALGGVSC STELASSTRP 
TRWGGQGYRL GAKVDDRNHD TELSVVL