Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39483 |
Symbol | |
ID | 7194974 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | - |
Start bp | 628296 |
End bp | 629851 |
Gene Length | 1556 bp |
Protein Length | 459 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183520 |
Protein GI | 219126554 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTATGC CGTATTCGGA TAAGTATAAA CCGAGAGTTG TTGATGTAGC TGATGGATGT ACTGCGTTTG ACGACCCGGT CACCGGTGAG ACGTTCATTT TGGATGTGTT CCAAGCATTG GACATGACGG GTGACTTACA GGACCCTTCG TTGCTGTGTC CGAATCAATT GCGGGCAAAT GGTTTAATTG TGGATGATGT CCCCAAACAT TTGTGTCACA ACCGCAAATC AACTCACTCT ATTTATATTC CTGAGATGAA ATTGCGTATT TCTTTGGAAT TACAGGGAGT TATGTCAGGG TTCCAGGCAT GGTTGCCTAC CCAGACGGAG ATTGAGACTT GTGTTCATGT CGAACTCACT GCACAGGAAG CGTGGGATCC TAGTTCTGAC GAGCTAGGAC AGCAAGAGCG TATACAAGAG ACTCGGATGT CTAACGTAGC TGGCACCGTG TCTACGTTAT TTCCCGATCG AAAATCGGAG ATCTCAGCAG TCTTATCGTC CGTCAGCTCT ACGCTTGTGG ATGATGACTT TGTTTGCGGA ATGGAACAGT CTGTTCGGAT CACATCGGCT GTGGCTAGTA GTACTGTGCG TACCAAGTTG CGGCACTCAA CGATGGAACC GATGGAGCTA TCGCGTCGTT GGGGCATTGG CCTCTCGACG GCACAGAAAA CTTTGAGAGT GACAACCCAG AAAGGTTTGC GGACTGCTGT CCACCCATTG CATCGCCGGT ACCGCACGCA ACAGCAGCAG CTTCGTTACA GTCGTCTGAA CTCCAAATTT TATTCTGACA CCATGTTTTC TTCATCGGTT TCTGTGCGAG GCAATACTTG TGGGCAAATC TTTGTGAATG ATTTGAACTA TAGTAAGTTT ATACCGTTGA AGAGCAAGGG TGACGCCGGA ATGGCATTGG AAGAACTCTT TCAAGACATC GGGGTGCCAA CGCATATGCA CACCGACGGA GCTAAAGAGC TCACCACTGG GCACTGGCGG AAAGTTTGCC AGAGCTACGG TCCGGTGAAG CAGACCATGT CTGAACCACT GACCCCGTGG CAAAACCGGG CGGAATCGGA GATCCGGGAA CTCAAGAAAC AAGTGCTTCG TATTATGTCC CATGAGGGTA TTCCGCAAAG ATTTTGGGAC TATGTTGCCG AGTATGTTTC GGAGATTCGG TCTCGGACTG CTCACCCATT GTACGATCTC AAAGGTAGGA CGCCCATCGA GCATGTCACC GGTGAGAACC CGGATATCAC GGAGTGGCTG GAGTACAGGA TGTACCAGCC TGTGTGGTAC TTGGACCCTG GGGACTTCCC AGAGGAGAAG AAATTGCTTG GCCGGTGGTT GGGTCCCGCA CACAGAGTCG GACAGGCGTT CTGTTGCTGG ATCGTTCCCA AGTCGGGACG AGTGATTGCA CGGTCTACGG TGCAGCCAGT TTCAGAAGAC AAGCGTGGAT TGGACAGTTT CAAGACTAGG TTGAAGGATT TTGACAAGTC AGTCCAGGAC TTCCTCAACA GGGGCGACGC ACACGTACCG GATGGTGGCA TTAGCTGGAA AGCTGA
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Protein sequence | MVMPYSDKYK PRVVDVADGC TAFDDPVTGE TFILDVFQAL DMTGDLQDPS LLCPNQLRAN GLIVDDVPKH LCHNRKSTHS IYIPEMKLRI SLELQGVMSG FQAWLPTQTE IETCVHVELT AQEAWDPSSD ELGQQERIQE TRMSNVAGTV STLFPDRKSE ISAVLSSVSS TLVDDDFVCG MEQSVRITSA VASSTVRTKL RHSTMEPMEL SRRWGIGLST AQKTLRVTTQ KGLRTAVHPL HRRKGDAGMA LEELFQDIGV PTHMHTDGAK ELTTGHWRKV CQSYGPVKQT MSEPLTPWQN RAESEIRELK KQVLRIMSHE GIPQRFWDYV AEYVSEIRSR TAHPLYDLKG RTPIEHVTGE NPDITEWLEY RMYQPVWYLD PGDFPEEKKL LGRWLGPAHR VGQAFCCWIV PKSGRVIARS TVQPVSEDKR GLDSFKTRLK DFDKSVQDFL NRGDAHLES
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