Gene PHATRDRAFT_39474 details

Gene Information

• Locus tag: PHATRDRAFT_39474
• ID: 7194969
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: -
• Start bp: 605425
• End bp: 610937
• Gene Length: 5513 bp
• Protein Length: 1250 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002183516
• Protein GI: 219126546

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.713077
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACCTT TGATCATTAA TCTCGTCGGT TTGTCGGATA CCGAAGCAGC TTTGTTTGCT 
GAAGCCGGTA TCACCGATCG GACTACCATC GCGTCGTTGG ACCTTCCCGC GTTCACGCAA 
GTGTTGGGAG ACCAGGTTGG GACGCTGGCG AAGCGATACA AACTGAAGCG TGTGGCTGAG 
TACCTCAGCA GCGGTAAGGA AATCGGTCCC GATACGACGA TGGGAGAGAT CAACCTCGCG 
TTGTCATCTA ACCATCAGAA TGTTGGAGCC AATGCTCCTA ACCCGGCTGC TGGACTTGAC 
CCTCGCCACG GAACGATGAA AGCGAGCATT AACACGATCT CGAAGTTTTC AGGTGATCTG 
GAAGATTTCG AAGACTGGTC GACGAAAACC GCAGCGGCTC TCGGAATCAC CGTTTACCGT 
AAACTTCTCG ACGGTCCTCC GGAAGTCGGA AATGATTTCG ATGCCGCCAG AAACAATGAG 
CTCTATCACA TGTTTGTGAT TGCTCTTGTG GATGGTGCTG CAATGCATAT CATGGAAGAC 
GTGAAGGACC AGAATGGATA CGCCGCGTGG ATGGCTATCA AGGAATGGTA TGGTATGTCG 
GATACCGGTC GGACGATCAT CGACAAGTAT CGTAGCAAGC TGGACACGCT ACTGCTTGAC 
GATGCGACCC CAGCCGGGAC TTTTGTCAAC CATTTCAAGA GATTCAGCCA GAAGCTCGAA 
GAAAACGGTG AGGGCTACAC GGCGGATACG AAACGACGTC AGTTTCTCGA CAAGATCATT 
GACGAAGACT ACGATGTGGT CAAACAGCAG TTGGAAGGCG ATTCGACTGC GGATTTTAAT 
GAATGTGTTG CGCGCATTCG TATGCGCGAG CAAGTCCTCA TGAAGGACTC CACTTTGTCG 
GCCAAGAAAG CTAGACGGTT CAAGTCGAGC GAGGGCGGCA AGTCGAACAG TGGAGGTCCG 
TCAAGTGGGA AAATTCCTTC GATTCCGAAC TCTATACTTA ACCTGGTCAA GCCGGCAAGT 
GCTCGCAAGA ATCTAATCAA GTGGAGGGGA GTTTGGAACT CCGAAGGGCG CATTCTTCGA 
TCGGACGAAC TGGCAAGCAC TGAGTATGAC GGGAAAGGTA AAACCCCGTC GAAAAGAGAG 
CACGACAATG GCAGTTCCGA CGAATCCGTC AAGACCCGCA ACACCCAAGG CAAGGGGGGT 
TCCTCGTCCA AGAAGGGCAA GAGAGGCAAG GGGAGGCGAA TCACCGGTGT TGTCCGTCGA 
ACGGAAACGA AGACATCCGG CACGCCTGAC TCCTCCATCC GGATCAGTAT GAAGGATCCG 
GACGACCACG TCGAAGGTGA TGAGTATGAC GATGTCGAAA TTGAGTCCGG TCAAGAGGAT 
GATTCTACTG CACCTGTGAA GAAAGAACGG GCGAAAAAGC AGAAGAATCC GTCGAAGCGG 
AAGCACAAGC GTGCCAAGTC TCGTCGAAGC CTCATCTCCC GCCGCGGACG CGTAGGCAAC 
GAGAAACCAA GAGCTATCCT AGACCCAGGG ACTGAATGCG ACATTGTTGG CGGGGACGTA 
TGGACAGTTC TGGAAAAGGT GATCGGTGTA GAAGCCCAGC TAGGCGGAGC TTTAGCAGGG 
ATGGGCAAAT GCAGCCTGCC ACTGGTTAAC GCGGTGGCTG CGTACGATCA TCCTAAAGAA 
GGAACGATCC TAATTGGTGC CGGTAACGTG GGATATGATG AAAGAAGCAC CCAGACGGAG 
TCGTTGTTCA ACACACACGA GTTACGAAAA CACGGTGTCA TTGTTTCGGA CACGACCATC 
CGGGATGGAG GGCTTCAAAG CATTGAAGTC GACGGAATTT CCATTGCATT GGACTTTGTC 
GACGAGAAAA CGCTTTCGTT CTACCTACGC AAACCGACCG AAAAGGAGCT AGAGAACTTG 
GAAATTCACT GGTTAAGTCC TCGAAGGCTA GTTAGATCTA GCATCCATCC TATTCGACGC 
ACGCCGGTTG CTATAGTTCC TGAGCGGGCT CCATGGGCCG AACGGCTTGG AAACTGCCCG 
GAGTTTACGT TATCGAAGAC TCTCCTGGCG ACGACGCAAC TATGTGCTGC CCCGGTCGAA 
ATGGATAAAC GAGAAGCTCC GCGTCAGCAT CGCAAGTCTC GCATTCATGC TTTGCATCCT 
CGTCGAATCG AGGGTCGCAC TGATTCGGAT ACATTCTTCT CGTCCGTTGA GTCTATTGAA 
GGGTTTCTGT GCGTGCAGAT TTTCTTTTGC CATGAATCTA ACTATACTTA TGTTCGAGGT 
ATGAGAAAGG AGTCGCAGTC GCACGGAGCG TATCAAGATT TTATACGGAA TGTGGGAGCA 
CCTAATGTTC TATTAACCGA CAATGCTAGA ACGCAAATCG GTAAAAAGTG GACTAAGACT 
AGTCGGGAAA ATGTAACTCG ACAGATCAAG TCCGTTCCGA ACAATCAAAA CCAAAACCAA 
GCCGAACGCA AAATTCAAGA CGTGAAAAAG CGAACTATTC TCACTTTGCG ATATGGAAAA 
ACACCGCTCA CATTTTGGTG TTTTTGCCAA CAATTTATTG TTGACTGTTT GAATCATTCG 
GCTCACAAGG ATTTAAATTT TCGCACCCCG ATGGAAAAAA TGTACGGTCA CACGCCGGAT 
ATTTCCATGT TTCGATTCCG ATTCTGGGAA CCCGTTTGGT ACTATGAACC AACGGCCAAG 
TACCCAGCTC CTAATTTTCT CCCTGGTCGT TTTGTTGGAA TTGCCTGGGA CCATGGCGAC 
GCTTTTACTT ACAAGATTTG GACTACTCCC AATAACGATT GGAAGCAAGG TCGCGAGCTT 
GTTCGAAATG TCGTCCGCTC GCGTCATTTG GAGGAAAAGG AGCCAGTGGT CTCCTACCAA 
GATGAAGATC TTCTCTTCAG CAAGACGCAG CCGTCGCGTA CGCAGCGTCG TCGCTCGAAA 
AAGCGAAACT CTCGTAGCGA CGACTCCCGT GGAGCCAAAG AAAGAAATTT GGACGGTAGT 
GAATTGGAGT CACTGGTCCG TTTTGATGAT ACTCCTCCTA TCACCAGCGT GGATTCAGAG 
GAGCAGGGGG GCGACAAAGC GGAAAGCCAA AGCGATCACT GTTCTCCCGT CGAAGTTGAA 
ACGTCCGACG GTGACGAGCT GTACGAAGAC AGTGAGTCAA AGACAACTAA CTCTACTATC 
AACTCGAAGA GGGCTCGCGA GGAGGTCGAC GGTTCAGCAC TTCAGTCTTT CGACCCGCTA 
AACAACGACG CGGAGGTCGA AATGACAAGC GAGATCAACG ACTACCTAGA CATAAACGAG 
TCCACGGCTT CAGGAGTTGG CGGAGCCCAT GTCACGAAAA TCGTCGGACA CAATTGGATG 
GACGGTCGAC TCAAGTTGAA GGTAACTTGG GCCACCGAGC AGACGACTTG GGAGGAGCTT 
CGAGACATGA AAGAGGATCA CCCCAAGATG ACTGCAGAAT ACATCGTGAG CACAGGCGGC 
GTTAGTAGGT CAACAACGAG AGGAGACCGA ACACTAGACT GGGCAAAGAA GACACTTCGC 
GATCTGCAAC GAGCAGTACG AAGAGTTGCT AGGCTGTACG ATTTTCATCT AGACGAACAC 
AACGATATCT ATTCGGTTAG ACGCGTTCAA AAACGTAAGA AGAAGAAGAT CTACTCTATT 
AAGCCTATTT TGAAATATGG CGTCAGAGTT CCAAGAAGTG TTCGAGACGC AATCGAGTTG 
GACAAGTCTA ATGGTAATTC CCTTTGGCAA GACGCGATCA AACTTGAAAT CACAAGTCTC 
ATTGATTTGG AGTGCTTTGA ATTCAAGCCA AGCGATTTTT CGCCGGGCAA CGAATTTCAG 
AAAACTACCC TCATGACCGT GTTCGATGTC AAGCAAGATC TTCGTCGCAA GGCCAGATTA 
GTTGCCGGCG GTCACCTTGT CGATGCGTTG GATCACGACA TTTACTCTTC GACGGTCAAA 
GGCATCAGTG TGAAGTTACT CCATGTAATT GCGCACAAGG CCAACCTGAA GCAACTTTGC 
GGAGACGTGG CGAATGCCTA TGTAAATGCC TACACGAACG AGAAGGTATA TGCAAAGGCA 
GGACCCGAAT TCGGCAGCGA TCTCGTAGGC AGCATTGTTA TTATACGAAA AGCGCTGTAC 
GGCCTACGAT CGAGCTCGGA ACGTTGGCAT GCACATTTTG CGGATACCCT ACGTGCATTA 
CAGTTCAAAC AGAGTCGTTA CGACAAGGAT GTTTGGATCA GATTGGGCAA CGAAAGCCTA 
TTCTACGAAT ATGTTTGTAC ACATGTGGAT GATTTTATGA TTGTTTCTAA AACACCAGAA 
AAAATCATGG AAAGTATAAA GGCAATTTAT TCAGTTAAAT CCGTCGGGCC TCCAGACTAC 
TATCTTGGAA ATGATTACAA GAAAGATCGA AAAGGCCGGT GGTGCATTGG ATGCAAAAAG 
TATCTTGTCG AAGCAATCAA GCGAGTAGAA AATATTTTCG GGAGTTTGAA AAAATACTCG 
TGTCCGTCTG AGACAGGCGA CCACCCGGAA TTGGATTCTA CACCTTTGTT GAGCGACGAC 
GAACATCAAA AGTACCAAAT GTTGATCGGA ATCCTAGTTT GGGTCGTGAC TATCGGACGG 
ATTGACGTCG CCCACGCGAC ATCTTCTCTT TCACGCTTCA CTGCGTGCCC TCGAAAGGGA 
CATTTGGAGC GCCTTCTGAG GGTTTTTGGA TATCTGAAGA AGCGACCAAA TCGGCGAATT 
GTTGTAGATT CCCGAGATCC CATCTACGAA GGCGGAGAAG ATTCGTTATC CCGAGATTTC 
ACGAAAGAAC TTGGCGATCA GTATCCTGGA GCTTTTGAAG AAATTGACGC TAACCTTCCC 
AAGCCGCTGA TCGACGAAAT CGAAATAACC GTGTTTGTCG ACTCTGACCA TGCCCACGAC 
AAGGTCTCGA GGCGTTCCAT AACCGGTCTT TTGATCTTTG TCGGGCGTAC CCCTGTTTTT 
TATACGAGTA AGCGACAGGG AGCCATTGAA ACATCGACAT ACGGTGCTGA ATTCTGTGGA 
ATGAAAACCG CCGTCGAGGA GTTGATTGCA GTACGTTACA TGCTTCGATG TCTGGGTGTA 
AAGGTCGAAC ATGCGAGTAT GATTTGTGGG GACAACCTTG GAGTCATCCA AAACGCCACT 
ATATCAGAAA GTCTATTGAA GAAAAAACAC GTTGCGATCG CGTATCACAA GACGCGCGAA 
GCCGCGGCCG CCGGAATATG TCACCCTATC AAGACGGGTG GGGTCGACAA CTTTGCAGAC 
ACGCTTACCA AGGCACAAAC GATTAAAACG TTTTGCACGC TGGTAGGTGG GTTTATGTTT 
GGTTAATCCG GGCACGTGGC TACGGATGAA GAGGAGTGTT AGAATTGTGT GTGTAGCACA 
CGAGACACTT CGGCATGTCA CCAGATGACG CAGACGGTGC GTGTGTCATC CGTCGCTACT 
TTCCTTTGTC CGTGCAACTA TGGAAGCCAT TCGCTGGTTC TAGTAACATG TAA 

 

Protein sequence

MEPLIINLVG LSDTEAALFA EAGITDRTTI ASLDLPAFTQ VLGDQVGTLA KRYKLKRVAE 
YLSSGKEIGP DTTMGEINLA LSSNHQNVGA NAPNPAAGLD PRHGTMKASI NTISKFSGDL 
EDFEDWSTKT AAALGITVYR KLLDGPPEVG NDFDAARNNE LYHMFVIALV DGAAMHIMED 
VKDQNGYAAW MAIKEWYGMS DTGRTIIDKY RSKLDTLLLD DATPAGTFVN HFKRFSQKLE 
ENGEGYTADT KRRQFLDKII DEDYDVVKQQ LEGDSTADFN ECVARIRMRE QVLMKDSTLS 
AKKARRFKSS EGGKSNSGGP SSGKIPSIPN SILNLVKPAS ARKNLIKWRG VWNSEGRILR 
SDELASTEYD GKGKTPSKRE HDNGSSDESV KTRNTQGKGG SSSKKGKRGK GRRITGVVRR 
TETKTSGTPD SSIRISMKDP DDHVEGDEYD DVEIESGQED DSTAPVKKER AKKQKNPSKR 
KHKRAKSRRS LISRRGRVGN EKPRAILDPG TECDIVGGDV WTVLEKVIGV EAQLGGALAG 
MGKCSLPLVN AVAAYDHPKE GTILIGAGNV GYDERSTQTE SLFNTHELRK HGVIVSDTTI 
RDGGLQSIEV DGISIALDFV DEKTLSFYLR KPTEKELENL EIHWLSPRRL VRSSIHPIRR 
TPVAIVPERA PWAERLGNCP EFTLSKTLLA TTQLCAAPVE MDKREAPRQH RKSRIHALHP 
RRIEGRTDSD TFFSSVESIE GFLCVQIFFC HESNYTYVRG MRKESQSHGA YQDFIRNVGA 
PNVLLTDNAR TQIGKKWTKT SRENVTRQIK SVPNNQNQNQ AERKIQDVKK RTILTLRYGK 
TPLTFWCFCQ QFIVDCLNHS AHKDLNFRTP MEKMYGHTPD ISMFRFRFWE PVWYYEPTAK 
YPAPNFLPGR FVGIAWDHGD AFTYKIWTTP NNDWKQGREL VRNVVRSRHL EEKEPVVSYQ 
DEDLLFSKTQ PSRTQRRRSK KRNSRSDDSR GAKERNLDGS ELESLVRFDD TPPITSVDSE 
EQGGDKAESQ SDHCSPVEVE TSDGDELYED SESKTTNSTI NSKRAREEVD GSALQSFDPL 
NNDAEVEMTS EINDYLDINE STASGVGGAH VTKIVGHNWM DGRLKLKVTW ATEQTTWEEL 
RDMKEDHPKM TAEYIVSTGG VSRSTTRGDR TLDWAKKTLR DLQRAVRRVA RLRVQKRKKK 
KIYSIKPILK YGHTRHFGMS PDDADGACVI RRYFPLSVQL WKPFAGSSNM