| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39361 |
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| Symbol | |
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| ID | 7195111 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | - |
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| Start bp | 284536 |
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| End bp | 286253 |
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| Gene Length | 1718 bp |
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| Protein Length | 561 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183459 |
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| Protein GI | 219126427 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00105183 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACT TGAACGCCGA TTTGCTGCTG AATGTTGTAC AGTATCTGTG CGCACGTGAC
GGATGTCGTT TGGCTGCGAC GGCATCTCGT TACTTCTACC TAGTGCATCA CTACCGTCAG
TTGCGGGGAG CGGAACTGGT TGCTGCTACG TCTTACATTC CACAGGTCAA ATCGCGTCAA
CAAACACCGC GAGACGTTTA CGAACAAGCC TTATCGAAGC TCCAATCGAA ACCAAACCTT
TGCTTAGCCT TCAACAAGCC GAGCGGTCCT TTGGCAGATC ACTTGCCACT GTTAGTGCCA
GATGATTGCG TCATCTTGGG GGCAATTTCC AGTTCCATCC AGTCCTCGTT TACGGGACAG
TTGGAATATA AATCAAATTC TTCTATCATG TTAGGTTCCA TGAAAGACGC ACAGATTCGC
CCCTTTTGTC TTCAACAGCA CGAACAATCA GGCGACTACC AGGGGACACT AGACCAGTTG
GATTCTGCAA ACTGTAGTTG GAAAGTATTT ATGGTGTATG CGTGCGGTGA CTTGGCGGCC
GACGTAGAAC CGTTTGTCAC GCATCTGCAA AATCGCTATC CTAACAGTAC GATTGTGGGA
GGCATTTGCA ATTCCGGCTA TATTTCTGTA CCAATTCAGC AAAAGACGAA GAGTGAATTG
ACCTCGATGC CTTTCCACAG TCTTTTGCAT TTGAATCAAC GCCTTGGGGG TCGAACACCT
GATGAGGGCA TTACAAAGGT CGAGCTTGTG CATCACGTAC ATGGTGTGAT GCAGACCAAA
CGATTTCAGT TGAAGGTGAT GGAGGACGAA GGCGGTGTCT TTGGGGTAGC ACTGGCAGGA
GATGTACCGG TCCGATCAAT GGTATCTAGA GGCGTCACGT CGTTGACATA TAGAGGTGCC
CCGCTGCCGA CCACTCCATT TTATGCGGAC GTTGTTGAAT TTCATCGTCC AGGAGACGAG
GAATATATGT TTCAGGGTGA AGATCCTCCG TCATATCACT TGATACGCCG CGTTCGGGAT
ACAGACTCGG GAAAAACGTA CTCGGCGCAC GAAATGATGA TGAAATTTGG ATCTCCCAAT
TTGATTGGGA TTCGCCGTCC GAATGAGGAT GGATTCGAGC TTCATATAGC AGCGGTAAGT
CGATCGCTGA TATGATTCTC TTTTAGTCGG AAGTGATGGA CCTCAACTTT TATTTCATTG
ATCGACAGAA TGACATCTCT CGAAGCTTAA ATGCGTTTCT GTTTATGGTT AGAGGCTCCC
CCGATACAGA AAAAGCTCTA ACGGACGCCA ACATTGACTT CTTTGACATT GACGGGGCTG
CCTGCATGCA AGATATGGAA GTTTCCATTC GCCATCTGAA AGAACAAACC CATGGCGAAC
AATTGTTGGG TGCTGTCATG TTCAGCTGCA GTGCCCGGGG CCCGACGGCT GGCAATTTGC
TGTCGGTGGA CATGGCAGAC GCCACCTCGT TTGCCAACGG CTTCCCAAAC GTCCCATGTT
TGGGATTCTA TGCTGGCGGA GAAATTGGAC CGGTTGCTCG TGCAGGGCGT CAAGACGTTT
TTCGTAGTGG AAATGCCACA TTGCAGGGCT TTACCGCTGT TTTTGCTCTA TTCATTGTAC
CCGAAATCGA CCTCGGCACG ATGATTCTGG ATGACAGGCG CGAAAATGTT GAGGCGTTCT
TACGAGGTCG CTTGGCCACG GGAATTCATG ACATTTAA
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| Protein sequence | MDDLNADLLL NVVQYLCARD GCRLAATASR YFYLVHHYRQ LRGAELVAAT SYIPQVKSRQ
QTPRDVYEQA LSKLQSKPNL CLAFNKPSGP LADHLPLLVP DDCVILGAIS SSIQSSFTGQ
LEYKSNSSIM LGSMKDAQIR PFCLQQHEQS GDYQGTLDQL DSANCSWKVF MVYACGDLAA
DVEPFVTHLQ NRYPNSTIVG GICNSGYISV PIQQKTKSEL TSMPFHSLLH LNQRLGGRTP
DEGITKVELV HHVHGVMQTK RFQLKVMEDE GGVFGVALAG DVPVRSMVSR GVTSLTYRGA
PLPTTPFYAD VVEFHRPGDE EYMFQGEDPP SYHLIRRVRD TDSGKTYSAH EMMMKFGSPN
LIGIRRPNED GFELHIAASE VMDLNFYFID RQNDISRSLN AFLFMVRGSP DTEKALTDAN
IDFFDIDGAA CMQDMEVSIR HLKEQTHGEQ LLGAVMFSCS ARGPTAGNLL SVDMADATSF
ANGFPNVPCL GFYAGGEIGP VARAGRQDVF RSGNATLQGF TAVFALFIVP EIDLGTMILD
DRRENVEAFL RGRLATGIHD I
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