Gene PHATRDRAFT_39317 details

Gene Information

• Locus tag: PHATRDRAFT_39317
• ID: 7195091
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: +
• Start bp: 198231
• End bp: 198902
• Gene Length: 672 bp
• Protein Length: 223 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002183314
• Protein GI: 219126124

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.72096
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGCAGC ATCAACAAAG CAAATCGTTG GCGACCGTCG GCACCAGTGC TACGGGAAGT 
ACGACATCAA CCAGCGCCGT GCCTACCGGG CCTCCGACCG TAACAGTAGC CGCCGCGTTG 
TCGCCTAAAC AATCGACGCG GCGACGGGGT AGCGCCATGC TACACCGTTG GCGCATGCGT 
AGCGGTAAAT GCTCTTCTAT ATACGACAGC TTTCCGTCCG CCGATACCAC CAATACCAGT 
CTACAGAATC GATTGGACCT TCATAAACAG GAGATCTTGG CCAACTCTCT GTCAACTGAT 
CAACTTAGCA GTATTTTGAG AGACTCAAAT CAGTTCAACG AATTTCAACA GGATCTTAAA 
GCGAAAGGCT GCACCACGAA CGCGTTTGCA AAAGTTTCCT GCTTCAGTCT TCTACGTGAT 
AGGCTTCAGG AAATGCAACA GCAGCCAAGC AATCACGATG GAGCAGATGT GGAGGAATTA 
GAATATTGGA CACACAAAGG CGAGGTAAAC GGACATTTTG ACTCTGAGGG TTTCTTATCG 
ACAAAACAGG CTCCAATAGT GATGGACGAA AAAGACCTAT ACCTCGAGAC TAGTCCACGA 
GCGGTGGCTA CAATAGGTTG TCTCGGAGAC GATCCTGTTT TCTTTTCTAC AAGAACTGGA 
GCAAGTCCAT GA 

 

Protein sequence

MWQHQQSKSL ATVGTSATGS TTSTSAVPTG PPTVTVAAAL SPKQSTRRRG SAMLHRWRMR 
SGKCSSIYDS FPSADTTNTS LQNRLDLHKQ EILANSLSTD QLSSILRDSN QFNEFQQDLK 
AKGCTTNAFA KVSCFSLLRD RLQEMQQQPS NHDGADVEEL EYWTHKGEVN GHFDSEGFLS 
TKQAPIVMDE KDLYLETSPR AVATIGCLGD DPVFFSTRTG ASP