Gene PHATRDRAFT_39306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39306 
Symbol 
ID7195038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp176212 
End bp177102 
Gene Length891 bp 
Protein Length296 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183434 
Protein GI219126374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.732678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAAA AGGCCGAAGC CTCGTTCTGG ACGGCGGAAG AAATTGATCT CGCCGGAGAT 
CTGCAAGATT GGGACAAGCT TTCTTCCAAC GAGCGTCACT TCGTCTCCCA CGTCCTCGCC
TTTTTCGCCG CTTCCGACGG TATCGTCAAC GAGAACCTCG CCGGCAACTT CGCCACGGAA
ATACAGTCCG CCGAAGCCCG CTGCTTTTAC GGATTCCAAA TTGCCGTCGA AAACATTCAT
TCCGAAACCT ATAGTCTCCT CATTGATACC TACGTCCGTG ACGCTGCCGA GAAGGATCAT
CTGCTGCACG CCATTGAGAC AGTCCCGTGT GTACAGAAAA AAGCCTCCTG GGCCTTGCAA
TGGTGCGACG CCAACCACGC CAGTTTTGCC GAACGCTGCG TTGCCTTTGC TGCCGTCGAA
GGCATCTTCT TCAGCGGCAG CTTTTGTGCC ATCTTTTGGC TCAAGAAACG CGGACTCATG
CCCGGTCTAT GCTTCTCCAA CGAACTTATC TCGCGGGACG AAGGACTGCA CTGCGACTTC
GCCTGCCTGC TTTATTCCAA ACTGCAAAAT CAACTACCCG TCGCCCGGAT CGTGGAGATT
ATCACCGATG CCGTGACCAT TGAACAAGAG TTTGTACAAG ATGCCCTGCC CGTGGAGCTG
ATCGGTATGA ACAGTACCCT CATGTGCCGC TACATTGAAT TCTGTGCCGA CCGACTGCTG
GTCGCCCTGG GCTGTCCCAA GCACTACAAG GCCGTCAACC CCTTTGACTG GATGGAAATG
ATCTCGCTAC AGGGCAAGAC CAACTTTTTT GAGAAGCGCG TGGGTGAGTA CGCCAAATCC
GGGGTCGGCG AAAAGGACAA TCACTGTTTT GATCTTGAAG CCGACTTTTA A
 
Protein sequence
MYKKAEASFW TAEEIDLAGD LQDWDKLSSN ERHFVSHVLA FFAASDGIVN ENLAGNFATE 
IQSAEARCFY GFQIAVENIH SETYSLLIDT YVRDAAEKDH LLHAIETVPC VQKKASWALQ
WCDANHASFA ERCVAFAAVE GIFFSGSFCA IFWLKKRGLM PGLCFSNELI SRDEGLHCDF
ACLLYSKLQN QLPVARIVEI ITDAVTIEQE FVQDALPVEL IGMNSTLMCR YIEFCADRLL
VALGCPKHYK AVNPFDWMEM ISLQGKTNFF EKRVGEYAKS GVGEKDNHCF DLEADF