| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39253 |
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| Symbol | |
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| ID | 7195189 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | - |
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| Start bp | 34555 |
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| End bp | 39299 |
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| Gene Length | 4745 bp |
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| Protein Length | 1538 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183412 |
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| Protein GI | 219126329 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGACG TAGAAGAAGT GGCAGAGGCA CTTCCGACGA TTCCCGAGGA CGTTCCGACC
CTGACGACCG AGGAAGCGAC AACGCTACCG GTGCCTGTTG CAAACTCTGA CCTTGACGAA
GTCACGGACG CTCCCGAATC CGTAGAGACG GAACAATCAC CGGAGATTGT CGAGGAAGAC
ATTGACACCT CCGAACCAGC CTCGGTCACG AATAGTACCA TGGACGACTA CGATTCTGTT
GCTAGTGAGC AATCCAACAA CGTGTCCAGG GACGAGGCCG ATTCTCACGA CTCGCATGAA
GAGGTGCAGG GGTTGACGGT GGCTTCTGCA GTAGGTCCCG TCTCTTCCCC GTCGCATGTC
AGTGGTCAGT TTGATGAAAT TGAAGTCGAC GAAAGCATGC TTCTACCAAC CGATGACGAA
GAGGAACTGA TTGAAGAAGA AACGGAACAA GTTGACTTCA GGGAAGATTC CTCCGGAGGC
TTTGAAGAAG TCGAGGTGCC TTCGGACAAC GAAGGCGACA TACTTATTGC GGATGACGAA
CCTCTTGAAG ATGATGATAC GCATGCCTCC ATCGATCAGG TCAGTGAATC GGACGATAGT
GCTCATAGCG GAGAGATTTC GCCAGAAGAT GAGGTACCGA ATGGCGACAC CTCGGACGAA
TCGATCTATA GCGTGAGTGA TGCGCCCCGC GAAGAATCTG TTCCTAGTCT CGACTCGGCG
GTCAGCTTGA GTACTGAAGA TAGGAGTTCG AATTCAGTGA GCTTCATGTT AGCCAACAAC
GAAGTATTCT CTCCCTCAGA TTCGGCTGTG GTTAACCCCA ACTTGTCCAT GGAGCCGCTC
ACGAAAACGG CTTCCGTCGC GCACACCGAG CCGCTCGAGT TTGAGCTAGA CGAAATGGGA
CCAGTCACAG GCATTCAAAT CGAGGACTCC AGCAGCCGTA CGTCCGTCAA TAGTTCTTCC
CACAGCGATC CATTCTCTCG TCAAACTGAC GACAGTAACG AGGTTGCCCT TATTCCATTT
GTAGACTCGA ACGAAAGCAA CGCCTCACAA TGGACACCAC TTTCAGCTTC TACTCCGGTC
ATGACTCCTT CAGGTAGGGT TTTTGCCCCT GCACCGCCAA CCATACGGAA TTCCACCATG
GGCTTGTACG AGGATGAACC GACGGACGAA ATGGGTGGCA TGGATCGTCA CAATGAAAAC
CCGACCGTGG TACCAAAACA CGAGGACTTA AATCGCAACA GCGGAGACAC GGCGAAGATT
GGTAAAGTAA CCGCTGCGGG GACAGTGGCA ACAGCTCTGG CAGCATCGGA GCGATCGCCA
CTGGATGCCA GCATGCCGAT GGAAGACGCC ATGTCAACGC ACCCAATAGA AACAAGCGGC
TCGTACCACG AAGCGGGTCT TGAGGACAAA TCATCTTCGC ACAATCTGGG GGAAGAGTTT
CACGACGAAT CAGCTTCCGG GGATGATAGC GTGTTCTCTG GTGCCGAAGA AGGTAGTGAT
GGCGATATGG AAGGCGTTGC TATTGAGGAG ACGGACGACG AAGAGCCCGA TGGCGTCAGA
GAAGAGTCCT TAGAAGAACT GGATCGCGAA GAATTCGAGT TCGATAGCGA CGATGGTGAT
GACGCTCGTG TCAAGGGGCA GTCTTCACTA GTACTGACAG CATACGCTGG TCCAGAAAGC
GATGAAGATT CCGTAAGCCT GGTACGCACG AGTGATGACG GAGAGGATAT CGAAATTGGT
CTGGAAGGGG CCTCGGAGAA GGATTCCGCT TCCTACCGAG ATGAATACGG AAAAAGCATG
GACGAGGAGG ACAGCCATTA TCGCGGGTGC TGTGCGGTTT TCTTGTCAAA TCCCTGTACG
CAACTTTTGT GCTGCGTCAT ATCCGTCTTG ATCATTCTAG GGGTCATATT GGTGGTGGTG
CTAGCGGGGG GCGATAGTCC GACGGATGGT GGTAGACCAT TCCCTACAGG TGCCCCTAAT
GGAGGGAGTG TAACGTCGGC CCCCACACCA GATGGTTTTA CACGAATGGT AAGTTGCGAA
TTGTGACACT TGACGAAAAT TTACATTAAA CGCCTCATAT TATATTGATT ACACAGCCGA
CCACTTTGCC TACAAACTCT CCAACTCCCT TCAATATCGA AAGTGTTTTA CTGGCGAAGC
TCAGCGGCAT TGCCGGATCG AGCTTTGGGT TTTCCGCCGC GATGACGCGA TCGTCTCGCT
CTTTCATGGC AATTGGTGCC CCGGAGGGCG GTGCCGGTTC GGTGTCAATG TATAGTAACT
CGACTGGTCA ATGGCAATCT TTTCAAGTTC TATCATCTCC ACAACAAGAA GGAAGATTCG
GAGCTGCAGT CTCGTTAACC GACGACACGT CCTCTACTGG TTTGATGGTC GGCGCACCAA
ATGTCCTCGC TACAGGCACA AACATACCTG TAGGAGCAGC CTACTATTAC GAGTACAACC
GTGCCGATGC CAGATGGGCA CAGCTTGGAT CAGTGATACA AGGAGGTGCG TTAGCGGAAA
ATGCCCAGGA GCACTTTGGT GCTGCAGTTG CAACCAGTGA TGTTTACAGG GTTGCCATTG
GTGCTCCAAT GAACAACGCC GCCGCTGCTC GTGCAGGACG TGTCTACACC TACGAATATA
GACAAGATGG AGCCATCTTT GACTGGGTCC CCATGTCTGA TTCGTCAGTG ACAGGCACAA
CAACAGATGA ACGATTCGGT TCCTCGCTTG ACATGTCCAC TGATGGAAAC GTCATGGTAG
TCGGTTCGCC CTTTCGAAGC CTTTTTTATA TTTACCAGTG GAACGGTAGC ACATGGTCCT
TCATATTCTC GGGGTCGACC CCTGGTGGAA ATCTAGATGA GGAGTTTGGA TCTTCGGTAG
CTGTCCTGTC CAATGACTTT ATCGCTGCTG GTGGTCCAGG TGCTAGTAAC GAGGCCGGGG
TCGTTCGAGT CTATGAGCTC CAAAATAACG GTTTGTTCCG ACAGTTTGGA CCAGATATCG
TTGGCAGAAA TGGCGAACGT ATTGGGGAGC TCAACAGTTT AACGGGAGCA ATCACTGAAC
GCGGCCCGGC TGTCTCGGTG GGTACTGTTG ACGGTCTTAT TAGAAGATTT GACTACAATG
CCAATCTCGG TGAATGGCAA GAACGCTTTG AAGCTGTCAG CACTGGATTT TCTGGACCAG
TGTCTTCACT ATCCATGGTC ACCAATGGAC TAGCAAGTTC GATTGTTGCA GGGCACGCTG
CAGGAAATGA AGCTGCCGTC TATGAAGCCT TCTTTGGACT CACGGCCAAC CCAGCTGGAG
TCCCAGACGT TACATTGCCG CCGGTAGCCT CTGATTCTCC TTCACCGACT GCTGTTCCGA
CCCCTCCGCC CGGGCCCGAG ACAATGACAC CTTCGCCTAC TGCTGTCCCG ATTCCTCAGC
CCAGTGCCGA GAGCTTGGTA CCGAGTCCTG GTGTTTCATC CTCTGCACCT TCTCTTTTGC
TGACGCTTTC ATCAGCTCCG TCGCCTGCTA CCGTCAATAT GACTGTTTTA CCGACTTTGG
CCCCTTTATC TGGGACCCCT TCGTCGGCTC CCAGTGTAGC TTTGTTGGCC ATTTCGCTTG
TTCGCCTTCT CCCAGGTGGA AGTCCGAACA CCGACACTGG CTCTTCCGTA GCTTTGACAG
ATTCTTCCTT GGCCTTCGGT GCACCGTTGT TCCAGAATGG GGGAGGCATT GTTCAGCCTT
ACCGAGGATC TGGAGGGGGC TATACTGCGC TGGATCCTAT CTTTGCCGTG AATGGTGGGC
GTTTTGGAGA AGCTGTCGAT GCTACGGACG GTGGTGGTCG TAATGCACTT TTGGTCGGAG
CCCCCACAGC TTTTGACGAG CAAGGCTTGA ATGTTCGCTT CGGCGCTGCC TACTACTATG
AGCTTGTCGG TGATGTGTAC TCTATGATTG GATCGACAAT AGAACCACCG CTGACGCCTC
AAGCTTCTGG CGGTCGATTT GGTACGTCTG TGGCCGTCGC CAGGAATATT AGACGAGTTG
CAATTGGTGC TCCCTTCACG AGTACGTCGG CCACTGTCCA GCGTACCGGT CGTGTTTACA
CATACGACTA TGACGGCACC AACTGGACAG CTTTGGAAAC GACTCCCGTA GAAGGCTTCG
TGACGGACGA TTTCTTGGGT TTCGATGTGG ATCTTTCCGA TGACGGTTCT CGTCTTCTTG
TAGGAGCACC AGGGAGCACT AGTGGTGTGG TGTTGTACTA TCAGCTTTCT GGACTTTTCT
GGCAACCTAT TTTTTCGCTA CCTGGCTTTG AATCAGACGA GCTCTTTGGG ACCACGGTCA
AGATTCTGAC TGCCGATGGC AATACCATAG CCATGGGAGG ACCAGGCTTT GGAGCCAGCA
ACAATGGCGT GATTCGGGTT TACAGACGAA GTAGCGATGG AACTTTCGTC CAGCAAGGCC
AAGATATTGT TGGCGCCGCC AACGAGCGAT TGGGAAACCG CAACACGCTC ACTGGTTCGA
ATGGCAAGTT GCTTGTCGGG ACGGCCAGTG GTACAGTCAA GCGACTAGAC TATATGGTTT
CCACGGATGA GTGGACTCAA GTTTCGGAGC AGGAGAACGT CAGCAGAATT TCGGCCCTCG
ATACTACTGG ATCGGTAGAC ACCTTCTTGT TGGGCGACGT AAGTCAATCT CAAGTTTCGT
TGTACACAAT CGGATAAAAC GTGCATAGTA ATTGTCAGTT CTTAATTGAA GCTTGCCCGG
AATAG
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| Protein sequence | MEDVEEVAEA LPTIPEDVPT LTTEEATTLP VPVANSDLDE VTDAPESVET EQSPEIVEED
IDTSEPASVT NSTMDDYDSV ASEQSNNVSR DEADSHDSHE EVQGLTVASA VGPVSSPSHV
SGQFDEIEVD ESMLLPTDDE EELIEEETEQ VDFREDSSGG FEEVEVPSDN EGDILIADDE
PLEDDDTHAS IDQVSESDDS AHSGEISPED EVPNGDTSDE SIYSVSDAPR EESVPSLDSA
VSLSTEDRSS NSVSFMLANN EVFSPSDSAV VNPNLSMEPL TKTASVAHTE PLEFELDEMG
PVTGIQIEDS SSRTSVNSSS HSDPFSRQTD DSNEVALIPF VDSNESNASQ WTPLSASTPV
MTPSGRVFAP APPTIRNSTM GLYEDEPTDE MGGMDRHNEN PTVVPKHEDL NRNSGDTAKI
GKVTAAGTVA TALAASERSP LDASMPMEDA MSTHPIETSG SYHEAGLEDK SSSHNLGEEF
HDESASGDDS VFSGAEEGSD GDMEGVAIEE TDDEEPDGVR EESLEELDRE EFEFDSDDGD
DARVKGQSSL VLTAYAGPES DEDSVSLVRT SDDGEDIEIG LEGASEKDSA SYRDEYGKSM
DEEDSHYRGC CAVFLSNPCT QLLCCVISVL IILGVILVVV LAGGDSPTDG GRPFPTGAPN
GGSVTSAPTP DGFTRMPTTL PTNSPTPFNI ESVLLAKLSG IAGSSFGFSA AMTRSSRSFM
AIGAPEGGAG SVSMYSNSTG QWQSFQVLSS PQQEGRFGAA VSLTDDTSST GLMVGAPNVL
ATGTNIPVGA AYYYEYNRAD ARWAQLGSVI QGGALAENAQ EHFGAAVATS DVYRVAIGAP
MNNAAAARAG RVYTYEYRQD GAIFDWVPMS DSSVTGTTTD ERFGSSLDMS TDGNVMVVGS
PFRSLFYIYQ WNGSTWSFIF SGSTPGGNLD EEFGSSVAVL SNDFIAAGGP GASNEAGVVR
VYELQNNGLF RQFGPDIVGR NGERIGELNS LTGAITERGP AVSVGTVDGL IRRFDYNANL
GEWQERFEAV STGFSGPVSS LSMVTNGLAS SIVAGHAAGN EAAVYEAFFG LTANPAGVPD
VTLPPVASDS PSPTAVPTPP PGPETMTPSP TAVPIPQPSA ESLVPSPGVS SSAPSLLLTL
SSAPSPATVN MTVLPTLAPL SGTPSSAPSV ALLAISLVRL LPGGSPNTDT GSSVALTDSS
LAFGAPLFQN GGGIVQPYRG SGGGYTALDP IFAVNGGRFG EAVDATDGGG RNALLVGAPT
AFDEQGLNVR FGAAYYYELV GDVYSMIGST IEPPLTPQAS GGRFGTSVAV ARNIRRVAIG
APFTSTSATV QRTGRVYTYD YDGTNWTALE TTPVEGFVTD DFLGFDVDLS DDGSRLLVGA
PGSTSGVVLY YQLSGLFWQP IFSLPGFESD ELFGTTVKIL TADGNTIAMG GPGFGASNNG
VIRVYRRSSD GTFVQQGQDI VGAANERLGN RNTLTGSNGK LLVGTASGTV KRLDYMVSTD
EWTQVSEQEN VSRISALDTT GSVDTFLLGD FLIEACPE
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