Gene PHATRDRAFT_29824 details

Gene Information

• Locus tag: PHATRDRAFT_29824
• ID: 7195006
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: +
• Start bp: 136354
• End bp: 142650
• Gene Length: 6297 bp
• Protein Length: 1177 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002183300
• Protein GI: 219126095

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.981906
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCAGCAGTCC AACATTAACA ACGAATTACG AGTAGTGCTG TAGCAGCGTC TCCTTTTTTT 
CGGTTCGTGC CAAGTTTACT ACATTTAGTC TCAGTTGGTG ACATTGCTGA GTATTCGTTC 
GTTACCATGT CGGCACTTCC TCCCAATCTC GACTTTGCGG CGACCGAGGT CGAAATTTGC 
GCAAAATGGA AACAGGAAAG CACGTTTCAA ACCCAGGACA AGCTCAGTTT GGACCGCGGT 
GATGAGGTGC GTGGGAGTGC GTAGAGCGGA CCCATTGACT CTGAATGAGA TCTATTGTCG 
CTCGCAAGTA CTCGTATGGT ACTTTCGTGC GTGCGTGATA CTGACACACT GTGTATTTTT 
GTTTTTGTTC GCGTACGGGT ACAGGAATTT ACGTTTTACG ACGGACCTCC GTTCGCCACG 
GGTCTACCCC ATTACGGCCA CATTCTGGCC GGTACCATCA AAGACACGGT CACGCGGTAC 
GCCGCCATGT CGGGCAAGCA CGTTTCCCGC CGGGCCGGAT GGGACTGTCA CGGACTGCCC 
GTCGAGTACG AGATTGACCA AAAACTCAAC ATTACCCACC GCGATCAAGT TTTGGAAATG 
GGCATTGACA AGTACAACGC CACGTGCCGA TCAATCGTCA CGCGATACAC GGCGGAATGG 
GAAAGTACCG TCACCCGACT CGGTCGCTGG ATTGATTTCG AAAACGATTA CAAGACCATG 
GATCCGTCCT TTATGGAAAG CGTTTGGTGG GTCTTTCGCC AATTGTTCGA TAAGAATCTC 
GTTTACCAAG GGTACAAGGT CATGCCCTAC TCAACGGCCT GTACAACCCC GCTCAGTAAC 
TTTGAAGCTG GTTTGAACTA CAAGGACGTC AAAGATCCGG CCGTGGTGGT GAGCTTCCCC 
ATACTGGGCG AACCACAGGA AGTCTCCTTC GTCGCGTGGA CCACCACCCC CTGGACCTTG 
CCGTCCAACT TGGCGCTCTG CGTCAACCCC GCCATGGAAT ACGTACAAAT CCTCGACAAG 
GCGACCAACC ACAGCTTTAT TCTCGCCAAA AGTAGACTGG CGCAACTGTA CCCCATCATG 
AACAACAAGA AAAAGTGGAA GCCCGAAAAA GCCGCCGAGT TGTACGAACT CCAAGCGACA 
ATGCCGGGTA CGGCGCTGGT CGGGAAACGC TACCAGCCGC TTTTTGACTT TTTCCAGGGA 
GAGCCGGGAT CGGAAAACTA CTGGCAGGTC GTGTCGGACT CCTACGTGAC GGACGATGCC 
GGTACCGGCG TGGTCCACCA GGCACCGGCC TTTGGAGAAG ACGATTACCG TGTCTGTCTC 
GCCCACGGCA TTATCGCCAA GGGAGGCGAA GTTCCCTGCC CGGTCGATGC CGACGGCAAC 
TTTGTCGATC TGATTGCACC CGTCAAGGGC ATGCACGTCA AGGCTGCCGA CGAGATTCTT 
ATTCAGCTCG TCAAGGACAG TGGCCGTCTG GTACAGAAGG ATGTCTTGCT GCATTCGTAT 
CCCTTTTGTT GGCGTTCGGA TACCCCCTTG ATCTACAAGG CGGTACCCTC GTGGTTCGTC 
AAGGTGGAAG AGATCCGCGA CCGCATCGTG GAGAACAACA AGCAAACACA CTGGGTGCCC 
AAAGAGGTTA AGGAAGGACG TTTCCACAAC TGGTTGTCCG ACGCCCGTGA TTGGGCCGTG 
TCGCGGAATC GGTTCTGGGG AACACCCATA CCTATTTGGG CCAACGACGA CCTCTCCGAA 
GTAGTTTGTA TTGGCAGTGT TGATGAGTTG GCGGAACTAT CCGGTGTTCG GGTGGAAGAT 
CTCCACCGCG AAACGGTGGA TCAGATCACC ATCCCGTCCC AGAAGACCCC GGGCGGCGTC 
CTGCGTCGCG TCGACGAGGT GTTTGATTGC TGGTTCGAAT CGGGATCCAT GCCGTACGCA 
CAGAGCCACT ACCCATTCGA AAATAAGGAG GGATGGGAAA AGGGGTTTCC TGCGGATTTC 
ATTGCGGAAG GCTTGGATCA AACGCGAGGT TGGTTCTACA CATTGATGGT CTTGTCCACG 
GCTTTGTTCG ACAAGCCCGC GTTCAAAAAC AATATCGTTA ATGGTATGGT GTTGGCATCC 
GACGGCCAGA AAATGTCCAA GCGCAAAAAG AACTATCCCG ACCCGAACAT TGTAATCAGC 
AAATACGGTG CGGATGCCCT CCGTATGTAT CTGGTCAACT CCCCTGTGGT ACGTGCTGAG 
TCGCTCAAGT TCAAGGAAGA AGGCGTCCTG GGAGTCGTCA AGGAGGTCTT TCTTCCGCTC 
TACAATGCCT TCCGCTTCTT TTTACAAAAT ATTGAACGGT GGGAACTTGA AGGCAGCAGC 
AAATTCGTGC CCGATCTTGA CAAGGTTCGC CAGACGGCGA ACCCCACCGA TATTTGGATT 
CAGGCCGAGA CTCAGGGTCT TATTAAATTC GTTCACGAAG AAATGGGCGC GTACCGACTG 
TACACCGTCA TGCCCGCTCT GGTATCGTTT GGCACACAGT TAACTAACTG GTACGTGCGT 
TTGAATCGGG ATCGTCTCAA AGGAGCCGAA GGAGAAGGTC AGGAAGCCGA TATCGAGGCT 
GAAACTGGTC TGCAGGTCCT CTACGATGTA CTTCTGAACG TGTCCATGAT TATGGCTCCT 
TTCACCCCGT TTATTACCGA GTTCTTTTAT CAACATTTGA GAAAATTCCA GCCTTCCTAT 
CTAGACGCTA CCAACGGAGG GGGCACCTCG AATCCGCCGA TGCCTGGAAA GAGTGACTCG 
GTCCACTTCT TGCGACTTCC TACTTATGAT GAAACTCGGT TGAACAAACA GGTCGTGGAA 
GCCATGGAAG CTTTGCAGAG TGTGGTAGAA CAAGGGAGAA ACGCTCGGGA AAAACGGAAC 
ATTAATCTAC GCACCCCCAT TAAAACTATT GTTGCCATTC TTCGGAATCC AGCAGATTAC 
GTTGTTGCTG GCATCACTGG CCCGCTAAAG CGATACATCT TAAGCGAACT TAACGTCTGG 
GATTTCAAGG TTGTCCCGGC AGAGGAAGAA CATGATTGGG TGACTCTAGC TTTAACACCT 
GATTTCAAAG TTCTCGGCAA AAAGCTTGGT AGCAAGATGA AAGCTGTGTC TGCAGCGGTC 
AAGGGCTTGT CACATGAACA AGCTGTAAAA TGCCTCGAAG ACGGAAAACT CGAGATTGAA 
AGAGTCGCAT TGGATACTGC AACAGAACTC GTTTCAAAAC TCACATTTTC TCGCGAGGGA 
GAACATTGGG AAGCCACGGA AAAGCCGGAC GGATCTTTGG TGGTTGCGAT CGACTGCACA 
CAGGATGAAG CAATTTTGTC GGCGGGAAGG TCGCGGGAGC TGATGAATGC TATTCAGCAG 
CTTCGAAAGA ATGCCGGCCT CGATCTCAAG GATGTTGTTG AGACTTTCTT TCGTGAAGAG 
GAAGGTGTGA CACTCGTGGA AGAAACGGTA GCTCGTAACG TTCCACTTTT CGAAGCAAAA 
TTCAAAGGTG CCGTTCCTCT GCCTTACCGT TTTGTGCCCA AGTGGGCGGT GGTCTTAAAG 
AACGAGACAG TGGACGTGGG AGGGACGAAA GTTGATGTGT TTATTTTCAG ACCGGCAGTA 
GCTGTTAAGG AATCTCTGGG TCCTTCAGTT GAGAGCGTGC TCTCAACACT GGAGCCCTCT 
AGTCTGCCGA AAGGTGGAAA GTTTAGCTTT TCCCTCGACG GAGTCTCAAC AACGTTGACC 
GAAGGAACTG ACTTCTGGCT GTCTACAACG GATAAGGTCC GATATACCAA AGTCTTGGCT 
TGGTTGAAAG TATCATAGTC GTCTCTAAGC TTAGCAATAG TACTTTTGAG TTATACAAGT 
TGGCGGCTTT TCACGTATCG CCAGAGCTAA CAGTGGAATA AAAGCGCTTG ACTGACTCAC 
TAAGCCGTCG CAGACTCTCG GCATTCCCTT CTCTTTCCCT CAGTAACCGA TCGATTGCCT 
CGGCCCTACG ATTCTCTGAT CGTTCTAGAG CAACAGCGAG CGACATGACG TGTGACCGAA 
GACTACCAAC GTCATTGGAG TGGCCTTGTG AGTTTGATGC TTCCAACGAT TCTGCAGCGC 
CATTTCGCTG GGCCACCTTT GTTTGCCTCA AGTGCTTGTT CAGATGATCA ACTTCTTCTT 
CCTTGGTTAC CAGGCGCGCT CTGGTTGACT CGAGAGCACT CTCAAGTGAC TCAACCTGAT 
GCCTCAGGTT CTCCATTTCG GACTCGTGTA TAGAGCCTTC GAATTCGCGC AGGTGCAACG 
ATTCAGCTGT TGCAAGAGAT TCCAAATGCG TCTGTTGAAA AATCTCTAGC TTGGCCTGGC 
TGGCTTGGAG CTCAAACTCA AGGCTGGACA CATTTTCCTT GTAGGACTCA ATCTTTTGCT 
CCGTTACGGA ACGCTCCAGA AGCAGATCGT TCAACCTCTG TTCGTAGCCC TCAACTGTTG 
CTGATAATTC AAGCGGTAAT GTCGATTCAA TACCATGTTC AGAGGGCTGC TCAATTGCTC 
TATTTGAGGC TTTGGCGGTG TCGAGTTGCT CACGTGACAA CTCAAGTTCT TTTCTGGTGT 
TTTGAAGCAT CTCTTCCAAT TCCTCTACAC GCTTATAGTG CTCGATACAT GCACGCTCTC 
TGGTCAAAAG TTTCTGTTTT ACACCTTCAA ATTCACTGGT GAAAGATGCT CTGTCAGTAT 
CAAACTGCAC TCCCAGCTCG TGAAGTTCTT CGTTCTTTGA GATCAATTCT TGATATACTC 
TCTGATATTC TTCATCTTGT TGAGTAGAGC GAATTCGAAG TTCCTCAGCT TCCTTTCGGT 
TTTGAACGAA ATCTTTTAGT TGTTCCTTAA GACTTACAAT TTCGGAAGAC TGAGCCATTG 
TCGCGTTCCG GAGCTCATTG CATTCAGTCT GAAGCTGCGT ACTAGAAGAA GATTTCTCCT 
GACCAGAGTA AGACGCAATC AAGTCTTCGT GTGCCACCTC AAGCTCCCGA ATTCGGGACA 
CTAACTCTCT GCGCTCTTCA CCGGCCTCCG CTATACTGAT TTCCAAGAAA TCCCGCGCTC 
TCGACAACTC AACATTACTT TTCAGCAGCT CTTGGTGCTT TTCCTGCATT GTAACCATTT 
TTGATGATAC CACATTGTCC GATCCTTTGA GAATCTCAAT TTCCTCTTGT AGCAGTTGCA 
CTTGTTCGTC GCCCTCATCC AGCTTCTCCT TCAACAACCC AAACTGCACA AGCATCTCTT 
CGTTCTCTTC AGCAAGAAGG TCCCGTTCTT TGCTGACTTC TTTCAAATTC GATTGATTAA 
CTTGGAGCTC ATGCTCGATA GAGTTCAATG CCCCTAGCTT ATCCGAAAGT AAACTGTTCT 
TTTCTTGAAG ACGCTCCAGA TCCTGCGACA AGCGATTTGA CGTTTCCAAG GCTTGCCCTT 
CGGCTTCCAG AATTGCAGCT TTGGATCGAT CTTCGACTTT TTGAAGTTCA CTCGACAATG 
TGACGTTATG TTGATCCAAG GCATCACACT TCAGCCGAAG GCTGGACAAT TCCTTATTTT 
GTCGAGACAT CGCTTCCTCC CATTGCCTCT TTGAATCTTC GAAAAATATC TTTGCCTCGA 
TCGCCGCTCT CTTCATGTCC TCCTTTTCCG AATTAAGAGC TTCTTTCTGG CTGACGGCGT 
TCTGGGCAAG ATTCTGCGCT TTCGCAAGCT CGGCTTTCAC CTTGCTGATC GTTTTGGCAT 
CGCGCAAACT CTGGGCAGAA TCTTCCAAAA GCTGCCGCTC GGCATTCGAC AACTTCAACA 
ATGCTTCTTG AAGAGAGTGC TCAGATTCTT CTAGCTTGGT AGCAAGCGTC GTTAGCTCGT 
TGTGTAGCTG CTGATTTTTA TGAGTGGCTT CAGCTGTTTC AGCCTTTTGA GCAGCTGCCA 
TGGTGTTCAT ATTTTCGATC TGAGATTCCA AAGACGCCGA GAGTGCTTGA GATGCAAGTA 
GTTCTTTGCT GTAATCCTCT TTCTCCTGGC GAAGAATTTC AATTGCATTC AATTTTTCAA 
CTACAGCGAC CTTCTCTGCC GCCAGCGCCT CCTTCGCGCG CTCGACCTCG ATCTTTAGGG 
CCTCTGTTTC ATGACTTTTT CTCTCATCTG AGTCTTCCTT CTCCAATCCA CAAGTATCAA 
CCAAACCTTG CAGAGAAGCT AGAGCTTCCT TGCTTTCAAT GAGTGACTCC TGAAGTAAGT 
CTCTCTCTCT TGCCACAGAT AGAAGCTCGC TAGCCAACGA GTCAGACTCA TTCGCCAGAG 
AGCGATATCG GGAGAGGTCC GCCAGAGCTG TACGCTTTTC GTCGGACAAA CCAGTTA 

 

Protein sequence

MSALPPNLDF AATEVEICAK WKQESTFQTQ DKLSLDRGDE EFTFYDGPPF ATGLPHYGHI 
LAGTIKDTVT RYAAMSGKHV SRRAGWDCHG LPVEYEIDQK LNITHRDQVL EMGIDKYNAT 
CRSIVTRYTA EWESTVTRLG RWIDFENDYK TMDPSFMESV WWVFRQLFDK NLVYQGYKVM 
PYSTACTTPL SNFEAGLNYK DVKDPAVVVS FPILGEPQEV SFVAWTTTPW TLPSNLALCV 
NPAMEYVQIL DKATNHSFIL AKSRLAQLYP IMNNKKKWKP EKAAELYELQ ATMPGTALVG 
KRYQPLFDFF QGEPGSENYW QVVSDSYVTD DAGTGVVHQA PAFGEDDYRV CLAHGIIAKG 
GEVPCPVDAD GNFVDLIAPV KGMHVKAADE ILIQLVKDSG RLVQKDVLLH SYPFCWRSDT 
PLIYKAVPSW FVKVEEIRDR IVENNKQTHW VPKEVKEGRF HNWLSDARDW AVSRNRFWGT 
PIPIWANDDL SEVVCIGSVD ELAELSGVRV EDLHRETVDQ ITIPSQKTPG GVLRRVDEVF 
DCWFESGSMP YAQSHYPFEN KEGWEKGFPA DFIAEGLDQT RGWFYTLMVL STALFDKPAF 
KNNIVNGMVL ASDGQKMSKR KKNYPDPNIV ISKYGADALR MYLVNSPVVR AESLKFKEEG 
VLGVVKEVFL PLYNAFRFFL QNIERWELEG SSKFVPDLDK VRQTANPTDI WIQAETQGLI 
KFVHEEMGAY RLYTVMPALV SFGTQLTNWY VRLNRDRLKG AEGEGQEADI EAETGLQVLY 
DVLLNVSMIM APFTPFITEF FYQHLRKFQP SYLDATNGGG TSNPPMPGKS DSVHFLRLPT 
YDETRLNKQV VEAMEALQSV VEQGRNAREK RNINLRTPIK TIVAILRNPA DYVVAGITGP 
LKRYILSELN VWDFKVVPAE EEHDWVTLAL TPDFKVLGKK LGSKMKAVSA AVKGLSHEQA 
VKCLEDGKLE IERVALDTAT ELVSKLTFSR EGEHWEATEK PDGSLVVAID CTQDEAILSA 
GRSRELMNAI QQLRKNAGLD LKDVVETFFR EEEGVTLVEE TVARNVPLFE AKFKGAVPLP 
YRFVPKWAVV LKNETVDVGG TKVDVFIFRP AVAVKESLGP SVESVLSTLE PSSLPKGGKF 
SFSLDGVSTT LTEGTDFWLS TTDKVRYTKV LAWLKVS