Gene PHATRDRAFT_22680 details

Gene Information

• Locus tag: PHATRDRAFT_22680
• Symbol: Lhcf13
• ID: 7194998
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: +
• Start bp: 102362
• End bp: 103125
• Gene Length: 764 bp
• Protein Length: 197 aa
• GC content: 52%
• Product: protein fucoxanthin chlorophyll a/c protein
• Protein accession: XP_002183291
• Protein GI: 219126076

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGTGCCCTCC CGCATCTTAC AATTCTTGTA GTGCCAGTGA GTAGTCCGAC GTAAATAACA 
ACATGAAGCT CCTTCTTGCC GCCTCTCTTG TCTCCGTTAC TTCCGCGTTT GCCCCGAGTT 
CGCTGAAGTC TGCTACCACA GCGCTTCAGG CGTCTCCCTA CGAGAATGAG CTTGGTGTGA 
TTGAGCCTAC TGGCTTTTTC GATCCTCTCG GTCTCTCGAA GGACATTGAT CAGGAAAAGT 
TCGACCAATA CCGTACTGCC GAACTCAAGC ATGGACGCGT CGCTCAGCTC GCCGTTATCG 
GATATGTTGT TCAGGAAATC TACCGCTTCC CCTTCGACAT CGCTCCGGGT CTTCCCTGCG 
CCGAGGTGCC GAACGGCGTT GCCGCTATCC AGGCAATCCC TGCGCTCGGC TGGGCGCAAA 
TCTTCTTCTT GGTAGGATCT GTTGACTACT ACGGCTACTT GGGAGACTTT GACGCCGGAA 
AACCCGATTT GGATCCCGCA GAGATGGAAA AGCGTCAGCT CAACGAACTC CAACACGGCC 
GCTTGGCCAT GTTGGCGATT CTTGAACTCC TCCGTCACGA TAGCCAGAAC TTGGTGCAGC 
CCGGATTTGA TGGCCTCAAT AACCTCATCA CGGGTCTCCC TTTCCTTTAC AAGTAAATCG 
ATAACGGTAT TGTGTAAAGC GAACAAGACG CAGACGTCGA GAACAGTACG CAAAAAGTTG 
TTTTAGAATA TACTTATAAG CTAATTCAGC GAGTATTGCT CCGC 

 

Protein sequence

MKLLLAASLV SVTSAFAPSS LKSATTALQA SPYENELGVI EPTGFFDPLG LSKDIDQEKF 
DQYRTAELKH GRVAQLAVIG YVVQEIYRFP FDIAPGLPCA EVPNGVAAIQ AIPALGWAQI 
FFLVGSVDYY GYLGDFDAGK PDLDPAEMEK RQLNELQHGR LAMLAILELL RHDSQNLVQP 
GFDGLNNLIT GLPFLYK