Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15324 |
Symbol | |
ID | 7195084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | - |
Start bp | 386269 |
End bp | 387402 |
Gene Length | 1134 bp |
Protein Length | 378 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183477 |
Protein GI | 219126465 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.101081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCCGCCGAC ACCTGACGGT GTGGGATTTG ATACTCATTG GAGTCGGTGG CACCATTGGC TCCGGGATCT TTGTATTGAC GGGACAAATT GCCGCTCAAT CCGCTGGTCC TTTGACTTTT CTGTCCTTTG CGATTGCCGG TATCGCCGCT TGTTGCTCCG GCGTGTGCTA CGCCGAATTA TCGGCACGGA TTCCGGCCGC CGGATCGACC TACGTGTACG CCTATGTCTG TCTGGGAGAA GTTGCGGCCG TCGTGGCGGC AGCCTGTCTC ACGCTCGAGT ACGGCGTCGC CGGGGCGGCC GTCGCACGAT CCTGGGGTGA CAAGGTCGTG CTGTGGATGC AAACGTCCTT TGGCGTGTCC GTGGCCTCCT GGATGATGCC CTGGGGCGTT AATCTTCCCG CCGCCGTCGT CTCGTTGGGA TCAACCCTTT TGCTGTTGGC TGGCGTGCAA GAAAGTAAGA ATGTTTCGAA CGTGATTACG TCGCTGAAAA TGGCGATTGT TGCGTTCATG ACCATTGGTG GCTTTATCCT CTACCAAAAA GTCAACATGC AAGCTCCGTT GGCGCCGTTC GGAGTGGACG GGGTCTTACG GGGCGCCACA ACCAGCTTTT TTGGATATCT CGGATACGAT GAAGTCTGTG TGGTAGCCGG GGAAGCTTTG CATCCTGCGA GAGACATGCC CCGAGCCGTC TTGGGGACCA TTTCAATTGT CACGGTGTTC TACGTGTTAT CGGCGCTAGC CTTGACCGGT ATGGTGCATT ACAGCGATAT TAGTCCGACG TCGGGCTTTC CCGAAGCCTT TGCTACCCGA CACGTTATGT GGGCCTCGCA ACTGACGGCG CTGGGGGAGC TCGTTACGCT ACCGGTCGTA GTACTGGTCT CCCTTATGGC CCAGCCGCGA TTGACCTTTG GTATGGCCAG TGATGGCTTG CTACCGGCAA TTTTTGCCCA AGTGGATAGC ACTGGAAATC TTCAAGGAGG AACATTGGTT TCTGGTTTGG TCATGACGTT CGTGGCAACG TTTATCCCCT TTGTGTACTT AAATGATTTG ATCAGCGCTG GCATTCTCCT CGCCTTTAGC ATGACCAACT CGTGTTTGCT GCTGTTGAGA TGCGAACCAC CGACTCGGCA ACCC
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Protein sequence | LRRHLTVWDL ILIGVGGTIG SGIFVLTGQI AAQSAGPLTF LSFAIAGIAA CCSGVCYAEL SARIPAAGST YVYAYVCLGE VAAVVAAACL TLEYGVAGAA VARSWGDKVV LWMQTSFGVS VASWMMPWGV NLPAAVVSLG STLLLLAGVQ ESKNVSNVIT SLKMAIVAFM TIGGFILYQK VNMQAPLAPF GVDGVLRGAT TSFFGYLGYD EVCVVAGEAL HPARDMPRAV LGTISIVTVF YVLSALALTG MVHYSDISPT SGFPEAFATR HVMWASQLTA LGELVTLPVV VLVSLMAQPR LTFGMASDGL LPAIFAQVDS TGNLQGGTLV SGLVMTFVAT FIPFVYLNDL ISAGILLAFS MTNSCLLLLR CEPPTRQP
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