Gene PHATRDRAFT_15301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15301 
Symbol 
ID7194984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp666739 
End bp667920 
Gene Length1182 bp 
Protein Length394 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183406 
Protein GI219126316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGTGCAATC GTGCCGCCGC TCACAGCAAG CTCGGCTACT TTTCCGAGGC AATATTGGAC 
TGCTCCGTGG CAACAAAGCT GGATCCTCAA TACTCTAAAG CATACATTCG GCAATCAAAG
GCTCTAGTAC AGCTCGGCCG ATTTTCTGAG GCGTGCAATG TATTGAACAA AGGGTTGCAA
TATCGGTCAA CTCCAGATAT GTTGAGAGAG CAAGAGACTT GCACCAATTT AAAGCTTCAG
TATGAAATTG CTATGTTTCA ATTGGAGAGC CAGAATTTTG CCTTAGCCAA GATTACATTC
GGGAATCTGC TGCAGACGTC GTGGGCGAAT GTGGTACTTT TGGGAGTTGC CCGGGCGGAT
TTGGGCCTAG GATTTGTGGA TTCTGCGAGT CGATTCTCAC TACAAGTCTT GAAGAAATCC
CCCCAGTCAG CTGAGGCGTA TGCATTACGT GGACACAGCT TTGTGTTAAT GGGAGAATTC
GAACCAGGTA TAAAGATGTT GAGGGAATCA ATGCGGCTGG ACCCCGATTG TACAAGAAAT
CGCCTCGTTT GGAAAGAATG TAAAAAACTA CAAAGTCTGT GGGATGACTC GTCGACCAAA
ACTTTCCATC GAAAGTTTGA ATGTGCGGTC GAATTGATGA CTGAAGCTAT TGAAAGTTGT
TCCCAATTGC CGCCGAAGGC CCCTCTGTTT GCTTTATTTC ATGTAAAGCG AGCGAAGGGA
TATCTACGAT TGAAGCTGTT CGACGAGGTG CTGAAGGACG TCGCTCTGGT AATCTACAAT
CGGGAAGACC ACATTGATGC ATGGTTGATT CGGTTCCAAG CTTTGCATGC ACTCGAGCGA
CACGAGGAGG CCTTGTCAGA TGCGACAGAT TTGATGGGAT CCTGGGGCCA AAACCATGGA
CAAATTCGAT TGGCGTTTGA CACGGCGGAC TTTACAGTAC GCAAAATGAA GCGACCTAAC
TTCTACAAGA TGCTACAAAT TTCGGAGATT GCATCAGAGC GCGAGATCAA GAGAGCCTAT
CGCCAAAAGG CTCTAGATTT ACATCCTGAT CGTCTCAGTG GGTCACAGTA TACATCAGAA
CAGCGGAGGA ACGCAGAATG TGAGTTCAAG CTGCTCGGAG AAGGCCTTGA AATACTTGCT
GATGAGTTTA AGCGACAATT GTACGATGAA GGATATGATC TG
 
Protein sequence
LCNRAAAHSK LGYFSEAILD CSVATKLDPQ YSKAYIRQSK ALVQLGRFSE ACNVLNKGLQ 
YRSTPDMLRE QETCTNLKLQ YEIAMFQLES QNFALAKITF GNLLQTSWAN VVLLGVARAD
LGLGFVDSAS RFSLQVLKKS PQSAEAYALR GHSFVLMGEF EPGIKMLRES MRLDPDCTRN
RLVWKECKKL QSLWDDSSTK TFHRKFECAV ELMTEAIESC SQLPPKAPLF ALFHVKRAKG
YLRLKLFDEV LKDVALVIYN REDHIDAWLI RFQALHALER HEEALSDATD LMGSWGQNHG
QIRLAFDTAD FTVRKMKRPN FYKMLQISEI ASEREIKRAY RQKALDLHPD RLSGSQYTSE
QRRNAECEFK LLGEGLEILA DEFKRQLYDE GYDL