Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_54940 |
Symbol | FRE3 |
ID | 7194899 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | - |
Start bp | 506372 |
End bp | 508059 |
Gene Length | 1688 bp |
Protein Length | 422 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | ferric reductase |
Protein accession | XP_002183236 |
Protein GI | 219125959 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.466499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCTTCTTGAG AATAACAACG CTAGAGTAGA GCTCAATTCC ACATCCTACT AGCTAGAGAG TCGAAATTTA GGTCGTAGAC TGCTCCGTCT CGAGCTATCA AACAGGTCAC CCCTTCAGAC TGAAGCTGGT CACGTACGAT ACGCAGATTC CACTGTCGCA CCTTGCAGTT CATTCCATCC CTTCGAGTCC ACAGTAATTA TTGATCTCAG AAGCAATGAA TCTGAACTTG CTACCGCCTC CGCTGTTCGT CTGCCTTGCG ATATTGTCGG TGTTAGCAAC GGCACAGCAG CAGCAACCGT CACCGAACGC CACCGGTTCG ACCTTTGACT GTTCCTTCCG CGGCTCCTTG GATATCTTCA ATGACGGCCG ATTGCTGGTT CAGCAAATTA CGCACCCAGA GGAAGAAACA GTGACCATTG AAATGACGTA TGCTGGACAA GGATGGATGG GTTTTGGCTT TTCGGAGCGC GGTGAAATGC TGAACAACAT TGGTAAGACA CTGAAACACA GCTTTTGATG AGCATCGAGA ATCACTTTCA TCTCAATTTT GTGTCCAACT GCTTTCATTT CTGTGGTAGC CGTTCTGGGC GAACCAGGCG TAGATTCCAC TACAGAGGTA CCCAACCCAT CCAAATGGTT CCTGGGTGGA TTTGCACTTT CACAGGTTTC GCGTGTGGCC ACGTTGCAGC AAACGTTGAC GGAATCGAGT ATTGTACAGA ACGATACCCA CACTGTGCTC CATTTTACCA AGCCGTTGGT GGAACCCAAT GAGCGAGATG TCCTTACCAA TGGCGCACCC AACACGGTTA TTTTTTCCGT CGGTGCGACC AACCAAATTT TGGGTCCGCA CATGCTGCAA GGCGCCTTTA CGCTCGAGCT GACACCTTGT CGGAACGTAA ACGAAGATCC AGACGAGGAA GCGCCGCTTG GAAATACCGG CGTGGACTTG TTCAATACAG AAGTGGCCAA GAAGAGTTTG TTGCAAGCGC ACGGATGGCT AATGGCCACG GCCTGGGGTG TGCTGGTACC CATCGGTGTC GGTGCCAGTC TCCTGCGATC CTGGTTGCCG GATGGACTCT GGTTTCGTCT GCATCAAGGT TTCAATACGT TGGTAAGTGT ATATGCAAGA AACATACGGA CCGCACAAAA ATTACAGACG TGCGGAAGGA ACCCCAGTCG CTTTGGCGCA TATTCGATGA CTTTCTTACC GCGTGTTTGT TTCAAATAGG CCATTTTGTG TGTGATTGCT GGTTTCGGAC TTGCGGTGCG CAGTGTCAGC AACCAGAATG AGTCCCATTT TGTGAACGAA ACACACACGT TGGTGGGTTT GTTGGTGTTT TTGTTGGCCA TTTTGCAGCT CGCGGGTGGC GTCTTTCGAC CGGCCGCACC GAAAGCAAAT GAGAGTGAGC TAGTAGCTCT CGACGCCGAT GACACCGCCA CCAACGAGGA AACGAAAGCG ACAAATCTAC CGATAAAAAA AAGCAGCTTC CGAATGCTTT GGGAATACAA GCACCGAGTC GTAGGCGTTG TGACCTTGCT TCTGGCGTGG CTGACATGTC AGACTGGATT GGAGTTGTAT GCTGAAATTT TTGGCGTAGA GGAGTCGACC ACAGCCTTTT GGAGCGTCAC AGGAGGATTG GCAGGTGTCA TAGTGGTGCT GACAATTTTT GCGAAGCTTC GAGGATAG
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Protein sequence | MNLNLLPPPL FVCLAILSVL ATAQQQQPSP NATGSTFDCS FRGSLDIFND GRLLVQQITH PEEETVTIEM TYAGQGWMGF GFSERGEMLN NIAVLGEPGV DSTTEVPNPS KWFLGGFALS QVSRVATLQQ TLTESSIVQN DTHTVLHFTK PLVEPNERDV LTNGAPNTVI FSVGATNQIL GPHMLQGAFT LELTPCRNVN EDPDEEAPLG NTGVDLFNTE VAKKSLLQAH GWLMATAWGV LVPIGVGASL LRSWLPDGLW FRLHQGFNTL AILCVIAGFG LAVRSVSNQN ESHFVNETHT LVGLLVFLLA ILQLAGGVFR PAAPKANESE LVALDADDTA TNEETKATNL PIKKSSFRML WEYKHRVVGV VTLLLAWLTC QTGLELYAEI FGVEESTTAF WSVTGGLAGV IVVLTIFAKL RG
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