Gene PHATRDRAFT_54940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_54940 
SymbolFRE3 
ID7194899 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011686 
Strand
Start bp506372 
End bp508059 
Gene Length1688 bp 
Protein Length422 aa 
Translation table 
GC content50% 
IMG OID 
Productferric reductase 
Protein accessionXP_002183236 
Protein GI219125959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.466499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCTTCTTGAG AATAACAACG CTAGAGTAGA GCTCAATTCC ACATCCTACT AGCTAGAGAG 
TCGAAATTTA GGTCGTAGAC TGCTCCGTCT CGAGCTATCA AACAGGTCAC CCCTTCAGAC
TGAAGCTGGT CACGTACGAT ACGCAGATTC CACTGTCGCA CCTTGCAGTT CATTCCATCC
CTTCGAGTCC ACAGTAATTA TTGATCTCAG AAGCAATGAA TCTGAACTTG CTACCGCCTC
CGCTGTTCGT CTGCCTTGCG ATATTGTCGG TGTTAGCAAC GGCACAGCAG CAGCAACCGT
CACCGAACGC CACCGGTTCG ACCTTTGACT GTTCCTTCCG CGGCTCCTTG GATATCTTCA
ATGACGGCCG ATTGCTGGTT CAGCAAATTA CGCACCCAGA GGAAGAAACA GTGACCATTG
AAATGACGTA TGCTGGACAA GGATGGATGG GTTTTGGCTT TTCGGAGCGC GGTGAAATGC
TGAACAACAT TGGTAAGACA CTGAAACACA GCTTTTGATG AGCATCGAGA ATCACTTTCA
TCTCAATTTT GTGTCCAACT GCTTTCATTT CTGTGGTAGC CGTTCTGGGC GAACCAGGCG
TAGATTCCAC TACAGAGGTA CCCAACCCAT CCAAATGGTT CCTGGGTGGA TTTGCACTTT
CACAGGTTTC GCGTGTGGCC ACGTTGCAGC AAACGTTGAC GGAATCGAGT ATTGTACAGA
ACGATACCCA CACTGTGCTC CATTTTACCA AGCCGTTGGT GGAACCCAAT GAGCGAGATG
TCCTTACCAA TGGCGCACCC AACACGGTTA TTTTTTCCGT CGGTGCGACC AACCAAATTT
TGGGTCCGCA CATGCTGCAA GGCGCCTTTA CGCTCGAGCT GACACCTTGT CGGAACGTAA
ACGAAGATCC AGACGAGGAA GCGCCGCTTG GAAATACCGG CGTGGACTTG TTCAATACAG
AAGTGGCCAA GAAGAGTTTG TTGCAAGCGC ACGGATGGCT AATGGCCACG GCCTGGGGTG
TGCTGGTACC CATCGGTGTC GGTGCCAGTC TCCTGCGATC CTGGTTGCCG GATGGACTCT
GGTTTCGTCT GCATCAAGGT TTCAATACGT TGGTAAGTGT ATATGCAAGA AACATACGGA
CCGCACAAAA ATTACAGACG TGCGGAAGGA ACCCCAGTCG CTTTGGCGCA TATTCGATGA
CTTTCTTACC GCGTGTTTGT TTCAAATAGG CCATTTTGTG TGTGATTGCT GGTTTCGGAC
TTGCGGTGCG CAGTGTCAGC AACCAGAATG AGTCCCATTT TGTGAACGAA ACACACACGT
TGGTGGGTTT GTTGGTGTTT TTGTTGGCCA TTTTGCAGCT CGCGGGTGGC GTCTTTCGAC
CGGCCGCACC GAAAGCAAAT GAGAGTGAGC TAGTAGCTCT CGACGCCGAT GACACCGCCA
CCAACGAGGA AACGAAAGCG ACAAATCTAC CGATAAAAAA AAGCAGCTTC CGAATGCTTT
GGGAATACAA GCACCGAGTC GTAGGCGTTG TGACCTTGCT TCTGGCGTGG CTGACATGTC
AGACTGGATT GGAGTTGTAT GCTGAAATTT TTGGCGTAGA GGAGTCGACC ACAGCCTTTT
GGAGCGTCAC AGGAGGATTG GCAGGTGTCA TAGTGGTGCT GACAATTTTT GCGAAGCTTC
GAGGATAG
 
Protein sequence
MNLNLLPPPL FVCLAILSVL ATAQQQQPSP NATGSTFDCS FRGSLDIFND GRLLVQQITH 
PEEETVTIEM TYAGQGWMGF GFSERGEMLN NIAVLGEPGV DSTTEVPNPS KWFLGGFALS
QVSRVATLQQ TLTESSIVQN DTHTVLHFTK PLVEPNERDV LTNGAPNTVI FSVGATNQIL
GPHMLQGAFT LELTPCRNVN EDPDEEAPLG NTGVDLFNTE VAKKSLLQAH GWLMATAWGV
LVPIGVGASL LRSWLPDGLW FRLHQGFNTL AILCVIAGFG LAVRSVSNQN ESHFVNETHT
LVGLLVFLLA ILQLAGGVFR PAAPKANESE LVALDADDTA TNEETKATNL PIKKSSFRML
WEYKHRVVGV VTLLLAWLTC QTGLELYAEI FGVEESTTAF WSVTGGLAGV IVVLTIFAKL
RG