Gene PHATRDRAFT_52444 details

Gene Information

• Locus tag: PHATRDRAFT_52444
• Symbol: CATR2
• ID: 7194896
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: +
• Start bp: 482358
• End bp: 482936
• Gene Length: 579 bp
• Protein Length: 192 aa
• GC content: 49%
• Product: caltractin
• Protein accession: XP_002183106
• Protein GI: 219125687

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.203781
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCATC CTAATTCTCG AGTAGACAAG GCTGTAATGC GACAATCGCT GGCCAAGCTT 
ACTCCATGTG AAATGGCCGA AATAGGCAAG ACCTTTGATG CGCTGGACAC GGATGCGAAC 
GGCTCCGTTA CGGACGACGA GCTGCGCGAG TTTTTGATGC GCTTGGGCAT GCCCTTAGTA 
ACTTCCAGTA TTGAGCAAAT GGTGGCGGTG TTGGATAAAA ATGGTGACGG GAAAGTGACA 
CGGGACGAGT TCTTGCATTG GTACATTGAG TCCATGCGGG AGGACCGATC AATGCATGAA 
CGTGCTATTG AGCTTTTCCA TCTCTTTGAC ACCAACCGCA ACGGGGAGAT TACCATTGGT 
GATTTTAAGG AAAAATTTGA CGCAATGCAC ATGGGATTTT CAGTGGACGA GATTGGAGCC 
ATTGTGAACG AGCTAGACCG AGATCGAAAT GGATCAGTCT CGTTGCACGA ATTCGAATAC 
TTTTTGGAAA AGTATTATCC CAAGGAGCTG CTGCGCTATC AAAAAGGTGG TGGGACGGGC 
ATTCAGTTGC ACAGGAATGC CGGGCAGGGA CATCCGTAG 

 

Protein sequence

MDHPNSRVDK AVMRQSLAKL TPCEMAEIGK TFDALDTDAN GSVTDDELRE FLMRLGMPLV 
TSSIEQMVAV LDKNGDGKVT RDEFLHWYIE SMREDRSMHE RAIELFHLFD TNRNGEITIG 
DFKEKFDAMH MGFSVDEIGA IVNELDRDRN GSVSLHEFEY FLEKYYPKEL LRYQKGGGTG 
IQLHRNAGQG HP