Gene PHATRDRAFT_48680 details

Gene Information

• Locus tag: PHATRDRAFT_48680
• ID: 7194863
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: -
• Start bp: 588147
• End bp: 590220
• Gene Length: 2074 bp
• Protein Length: 571 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002183248
• Protein GI: 219125984

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGACCGCTTT CTCACTCGGA GCCTCGTCGT GTCGGTCGTC GAACAAGCAG ACCACTCACT 
GTTAGATCCA TAAACACACT TGTCTATCCA AGTCCTCTCG CAGTAACTCC TCGACATCAC 
AATCATGGTA TCTTGGACGA TTGCTGCCGC CTTTCTCTTC ACGCCGACGG CGGCTTGGGT 
CTCCCGACCC GTGTCGCAAG TTCGATCGTC TCCGTCGATG CTGCGCATGT CCAGCGATCA 
GTTCACGGTC GCCTGTCTAG GCGACTTGCA CTTGGATCCT CGGTACATGG AAGACTACTA 
TACTGGTCGT GATCAATGGT TGAATATCAT CGATGAAGCC AAGGCCGATC ACGGCAACGT 
TGCGCTCGTG TCTCTCGGCG ACTTGGGCGA ATCCAAGTCG GTCCGTCCGG AAGAAACCTC 
GGAACTCTTC GCCGGCACAA CGGAATGTCA CGAACTCGCC GCCGAGTTCT TGCAATCCTT 
CGGTGTTCCC TACGAAGTCG TCGGCGGCAA CCACGACCTG GAAGGTATTG ACGAATTCGC 
CACGGACAAG GAGAATCTCA AAATGTTTCT AGAAAAGCAC GGCAAGCCCA CGCCGCATTT 
CTCCCGGAAG ATCGCCGACA AGACGCTCTT GGTCGGCCTC TCGTCGACTG TCTTTCGGGA 
TGCCGAATAC ACCTCGCACG AAGTTACCAT TGACGACGCA CAGATGGCCT GGTTCGAACA 
GACCCTGAAG GATCATCCCG CCGCGGACGG ATGGCGATTG TTCGTCTTTA CCCACGCGCC 
ACCCAACGGC TCTGGATTGC GCGTCCTGCA AGAGAACCAC GTCGTTAACG GTTGTTGCTG 
GCTCAACCAT TCCAACGACA AAAAGTGTCG CAAGTTTATC GAACTGGTAC GCGAGCACCG 
TTGCATCAAG GCGTGGTTTT CCGGTCACTT CCATTTGGGA CAGGGTACGT AATCTCGGGG 
GAAAAACACT GCCAGAGGCC GACGCGGCCA CGGCCCCAAC GCAACCCGAC CCTCCAAATC 
TCAATTGCTC TTTTTCGTTT GTTGCAAAAC CCAATCACAG ATTACCAAGA TTCCATTACC 
TTCCCCACCA TTGACCCCAA GGACGGCCCT TACCCCAACC GCGGTTCCTG CACCTTTGTC 
CAAACTTCGG TTATGCGTTC GGGATCCTCG CGGGACGGTC GCCAGCAGTC CCGCCTGATT 
CGCGGAAACA AGGACGGCTT CGAAATCTGC ACCGTCGACC ACAAGGAGGA TGGCAAGGTC 
CGTGTGGACG CCACCATTAG TTACCGTGGT GACACCAACG AAGTCGGTAT CTACGAACAC 
GAAGACGAAG TCAAAAAAGG CGACGAACTC TTCAAGGTCT ACGCCCCATC CGCCGGTGAC 
GACTTGCACG CTCCGGATGA AGGCCACGTG CGTTACAACG ACGATGGTCA AGTCAAGATT 
GATCTCGACG TGACCGAAGA CACCAAGGCA TGGTGGTACA TGTCCGACGG CCGTGTCCTC 
GGTATGCTTA AGGGCATGTT GATTGAATAC GATCGATCCA CCCTGGCTCC GCTCGGTTTG 
GTCGTGGGCG CCGACGAGCT GGTCGGCAAG CGCGTGGCCG TCATCGACTC GGGACTCGAC 
GACGAAGAGT GCGTTATATC CGACGAGCTT GGGATGGAAG GCATCGAATG TGGCGGGGAA 
CCAGGTCGCG AACAGGCTGT CATTCTCGTC GACAAGGACG ACGGTTCGGT CGTTGTGGTA 
CAACCCAACG AGGATGGCTC GTACTGGCGT AAAATTGTCC GCAACAAGAT GATCCGTATG 
AAGGAAGTGC GCCGGGTCAA GGCGGCCAAG GAATTTGCCA AGTCGTTGAT GGACAAAGAA 
GTGGAAGTAG TCAGCTCCTG GGGTCCCTAC ACTACTACCA GTGGCACCGC CAAGAAAACG 
GGAGTCCAAG GTTTGACGGC ACCGGCACGC AAGTAATTAC GATCTTCATC GTCGCTGTGC 
CTAGTAGTGT CAAGAATGGA GCTTAGATGA TAATAGGAGA TTGTCACGTA GTAGTATAAC 
ATTATACGTT AGCAAGGAAC ACAGAACGTG ATAC 

 

Protein sequence

MVSWTIAAAF LFTPTAAWVS RPVSQVRSSP SMLRMSSDQF TVACLGDLHL DPRYMEDYYT 
GRDQWLNIID EAKADHGNVA LVSLGDLGES KSVRPEETSE LFAGTTECHE LAAEFLQSFG 
VPYEVVGGNH DLEGIDEFAT DKENLKMFLE KHGKPTPHFS RKIADKTLLV GLSSTVFRDA 
EYTSHEVTID DAQMAWFEQT LKDHPAADGW RLFVFTHAPP NGSGLRVLQE NHVVNGCCWL 
NHSNDKKCRK FIELVREHRC IKAWFSGHFH LGQDYQDSIT FPTIDPKDGP YPNRGSCTFV 
QTSVMRSGSS RDGRQQSRLI RGNKDGFEIC TVDHKEDGKV RVDATISYRG DTNEVGIYEH 
EDEVKKGDEL FKVYAPSAGD DLHAPDEGHV RYNDDGQVKI DLDVTEDTKA WWYMSDGRVL 
GMLKGMLIEY DRSTLAPLGL VVGADELVGK RVAVIDSGLD DEECVISDEL GMEGIECGGE 
PGREQAVILV DKDDGSVVVV QPNEDGSYWR KIVRNKMIRM KEVRRVKAAK EFAKSLMDKE 
VEVVSSWGPY TTTSGTAKKT GVQGLTAPAR K