| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48678 |
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| Symbol | |
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| ID | 7194911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | + |
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| Start bp | 583732 |
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| End bp | 586152 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183122 |
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| Protein GI | 219125720 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.26048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTGT TGGAAACAGC AAATCATTGG GCCTCCCATC CTTCCGACTC GGAGAAGGAT
CCGAGCAAAC CAGAAGAGAA GATGAGAGCC GCCTGCGCCG AAGGAAACGG GATTGCTGAG
AAGGAAACAA ATGCGGTAAA TGCCATTCGA TTGGCTACAT TTGCAGTCCT TGTGCTGGTT
GCCCTCACAG TCTCTCTTTT GGTATACTTT CATACTAAAG ATACTGAAGA AGGTGAATTT
GCGGCTCAAT TTATTTCGCA TGGGGGGAAA GTCGTCGATT CATTCCGCGC GAATGCTGAG
AGTCGGCTCG CTGCATTGAG TAGTTTTTCT GCGTCTGTCA CGTCCTATGC GTTGCACTCG
AACCAAAGCT TTCCATTCGT CACCCTACCA GATTTCGAGC GCAGAGCAGC CTTTACGTTG
CAGCTGGCGC AGGTGCTTTC AATAGCCGTA AACGCAATTG TTAGCCAGGA CAATCGTGCC
GAATGGGAAG CGTACTCAGT CCTAAACCAA GGATGGCTCG CTGAAGGTCT TTCACTCCAA
CAAGCGGTCG TGGACGAGGA TGAAAACGAA TCAGTTCAGC AATTTCAAAA TCAAACATCT
TCGGGTGTTC TTGGCGAAGA TGTTACAAGC AGCCTAGACA TTGTCCCGTT CATTTTCAGC
CTAGAAGAAG GCGGAACTAC ATCAGCGTAC GAGACAGGTC CTGGTCCGTT CGTTCCAATT
TGGCAGATAG CCCCAGCGAT TCCTCTTCCG TCGCTTATCA ATTTCAATGG GCTCACTCAT
CCAACTACAC AAGCAGAGTT GCGCACGGTT CTTGCGACAG GACAGAGACT TGTCGGTCCT
GCCGCAGACT ATTCTGACGA CTTGGACCCA AGCATAGCGG GAAGGAAAGC GCTACTCAAT
CTTTTCTTAA ATCGCTGGAA GAGTGGGGGG AATGACTATG AGGAGGGACC GGTCAGCGAA
ATTTATGTTC CAATCCAGGA TAGATTTGGC CCAAATAGCA CGATGGCTGG TGTTTTCTCC
TCAACCATAT ATTGGCAGGT CTACTTTACG GATATTTTAC CAGAAACAGC GCAAGGTGTT
ATCTGTGTGC TGGAAAACAC CTGCTCCCAG AGCTTCACTT ACGTGATCAA TGGAGCTCAA
GCGAGTTACC TTGGTCAGGG CGATCTACAT GACCCGTCTT ACGATGAATA CATGATTGAA
ACCGGATTTG GCGCATTTAT TGGACGCGAC AACGTAGCAG CAAGTCGAGA TGGAAATTGT
TACTACAATG TTCGTGCGTA CCCATCGAAA GAAATGGAGG AATTATATAT CACGAGGGAG
CCTTTATACT TCACTCTTAC TCTGGTTGCC GTTTTTGTGT TTACTTCTCT GGTATTTGTC
GCGTACGATT GTCTGGTACA ACGCCGTCAC ACTGTTGTCA ACAAATCCGC TCTACAATCA
AATGCGGTTG TCTCCTCTCT CTTTCCTGAA GAAGTTCGCA GCCGGTTACC CAGTCTGTAC
GCCTCGAAAA CTGAACGGGA CGCCGCAACC AAATCTATGC AGCATGAGAA GGATGATAAC
GATGACAGTT TTGACGACTA CTACGACGAT TCTCTTCCAA TTGCTGATCT TTATCCGAAC
TGCACTGTGC TCTTTGCAGA TATTGCAGGG TTTACTGCAT GGAGCTCCAA CCGATCCCCG
ACCGAGGTGT TCAAGCTACT AGAGACAATG TACGGCCTTT TCGACAAGAT TGCGCACAAG
TATTCCGTCT TCAAGATCGA GACTATTGGA GACTGTTATG TTGCAGTGAC GGGCCTTCCC
AAGCCTCAAG AAATGCATGC AATCATCATG TGTCGTTTCG CCAACGCCTG TATCGTACGT
ATGAGCCAGA TGATGCACGT TTTAGTGGAA AAATTGGGCC CGGATACTGC AAATCTCTCT
ATGCGTGTTG GATTGCACAG TGGCCCAGTG ACGGCTGGAG TGCTGCGCGG TGAAAAGGCC
CGCTTTCAGC TTTTTGGGGA CACCGTCAAC ACAGCAGCTC GTATGGAAAG TACGGGGCAA
AAGGGACGAA TCCACGTTTC CGAATCCACA GCTACATTGC TGATCAACGC GGGGAAACAG
GCGTGGATTA ACGCACGCGA CGAGCTTGTA CAGGCCAAGG GGAAGGGTGA GATGCAAACG
TACTGGGTCA AGCCTCCGGA TGTTGGTACT AAATCTACCA CAACCACTTC TTCGGGCCCC
AGCGGCCGGG ACCTGTCTCT CTCGCAGGCT CTGCTTGAGG CGCATAGTTT GAAGATGGAC
CAGAAGCTTT CCGAAAGCAA AGCGAGCGCG CAAAAGTACG AAGACTTACT TGATAGCTTT
CGTGAGATTG AGGTGTCCGA AAAGAAGAAT GAGGTGGAGT CTTCTCCTGA GCCAAGAAAA
AAAGAACACC GTTTCGTCTA A
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| Protein sequence | MPVLETANHW ASHPSDSEKD PSKPEEKMRA ACAEGNGIAE KETNAVNAIR LATFAVLVLV
ALTVSLLVYF HTKDTEEGEF AAQFISHGGK VVDSFRANAE SRLAALSSFS ASVTSYALHS
NQSFPFVTLP DFERRAAFTL QLAQVLSIAV NAIVSQDNRA EWEAYSVLNQ GWLAEGLSLQ
QAVVDEDENE SVQQFQNQTS SGVLGEDVTS SLDIVPFIFS LEEGGTTSAY ETGPGPFVPI
WQIAPAIPLP SLINFNGLTH PTTQAELRTV LATGQRLVGP AADYSDDLDP SIAGRKALLN
LFLNRWKSGG NDYEEGPVSE IYVPIQDRFG PNSTMAGVFS STIYWQVYFT DILPETAQGV
ICVLENTCSQ SFTYVINGAQ ASYLGQGDLH DPSYDEYMIE TGFGAFIGRD NVAASRDGNC
YYNVRAYPSK EMEELYITRE PLYFTLTLVA VFVFTSLVFV AYDCLVQRRH TVVNKSALQS
NAVVSSLFPE EVRSRLPSLY ASKTERDAAT KSMQHEKDDN DDSFDDYYDD SLPIADLYPN
CTVLFADIAG FTAWSSNRSP TEVFKLLETM YGLFDKIAHK YSVFKIETIG DCYVAVTGLP
KPQEMHAIIM CRFANACIVR MSQMMHVLVE KLGPDTANLS MRVGLHSGPV TAGVLRGEKA
RFQLFGDTVN TAARMESTGQ KGRIHVSEST ATLLINAGKQ AWINARDELV QAKGKGEMQT
YWVKPPDVGT KSTTTTSSGP SGRDLSLSQA LLEAHSLKMD QKLSESKASA QKYEDLLDSF
REIEVSEKKN EVESSPEPRK KEHRFV
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